DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nolo and LOC100001991

DIOPT Version :9

Sequence 1:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster
Sequence 2:XP_001341878.1 Gene:LOC100001991 / 100001991 -ID:- Length:927 Species:Danio rerio


Alignment Length:571 Identity:138/571 - (24%)
Similarity:196/571 - (34%) Gaps:190/571 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TSPKIW---AALFVTTL-------CLLD---TQAAWAKKL---------NASQAFDDTW----NT 46
            |||  |   :||:||..       ||||   |..|...:|         ...|.|.:.:    ||
Zfish   388 TSP--WSPCSALYVTEFFDNGHGDCLLDAPETTVALPTELPGLTYSLDRQCQQIFGEEFSHCPNT 450

  Fly    47 ASDLENE---LEQQKRSKVQSAGG------GGGAGGG---------------------PGQWSSW 81
            :|....|   .:|:.:|...:..|      |...|..                     .|.|..|
Zfish   451 SSSEVCERLWCQQEGQSMCTTRNGSLPWADGTSCGTNRTCLNSVCMSSEDVLRPQPAVDGGWGEW 515

  Fly    82 SDWSTCSRTCDGGIMHQMRRCGSPGS------CRGESTRYRICNMQPCPEQ--QDFRSSQCSAYN 138
            ..|..|||:|.||:|...|.|..|..      |.|:...|:.||.|.|...  :.||..||..||
Zfish   516 GSWQPCSRSCGGGVMFSYRECNRPSPQNGGKYCVGQRVNYQSCNKQACENNRGKSFREEQCEKYN 580

  Fly   139 DVPY---DGTLYKWTPHYDYV---EPCALTCRGHPAHLVEDISRETGDGNAEEAEHYDEQSVIVQ 197
            :..:   .|.:.:|.|.|..|   :.|.|.||..              |::|          ...
Zfish   581 NPNHFDIHGNVKQWIPKYAGVSLRDRCKLFCRAR--------------GSSE----------FRV 621

  Fly   198 LSARVQDGTRCRSGSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSC------------- 249
            .:.:|.|||.|...:...|:||:|.:.||||:|.|:||:|.|.||||:|.||             
Zfish   622 FAPKVIDGTPCGPDTTSFCVQGQCIKAGCDLEIDSSKKLDKCAVCGGNGQSCRIISGSFNKVVHG 686

  Fly   250 -------SQPLFNWEMAPMSQCSVTCGSGYKMSRPICRNRLTNADVD------------------ 289
                   .....|..:...|..|:.....|...|....|.:.|.:..                  
Zfish   687 YRDIVTIPSGATNINIKQQSHGSIPHDGHYLAVRRENGNYILNGNFSVSTVEQHIPVLGAVLKYS 751

  Fly   290 ------DTLCSVTNRPE-ASVEQCNT--HSCPPR------------------------------- 314
                  :.|.|.....| .:::..:|  .|.||:                               
Zfish   752 GSSTTLERLQSFRQLQEPITIQLLSTAAESIPPKVKYTFYIPKSMAFSKPKDKKIAGKLIHPFGV 816

  Fly   315 --WIADDWSTCSRLCGHGYRERMVVCAEESNGIKTRVADIMC-RTPKPPTQETCIIEECPHWEVE 376
              ||:.:||.||:.||.|:..|.|.|.:.:......     | :..:|.....|....||.|::.
Zfish   817 PQWISSEWSECSKTCGSGWSRRNVECKDNAGFYSNH-----CNKDLRPSDIRPCADLPCPIWQIG 876

  Fly   377 DWTGCSVSCGQGIQMRGVECKSTDGSL--SAKCDPLTKPGSM------QQC 419
            .|:.||.:||.|.:.|.:.|....|..  ...|||...|.|:      |:|
Zfish   877 PWSSCSQTCGHGERQRKILCIDYTGKTVEPENCDPAKMPESVSEKCFYQEC 927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
noloNP_001036374.1 TSP1 78..124 CDD:214559 19/51 (37%)
TSP1 546..600 CDD:214559
TSP1 750..807 CDD:214559
IGc2 845..902 CDD:197706
PLAC 1355..1384 CDD:285849
LOC100001991XP_001341878.1 Pep_M12B_propep 40..165 CDD:279848
Reprolysin 206..415 CDD:279729 12/28 (43%)
ZnMc_ADAMTS_like 206..412 CDD:239801 9/25 (36%)
ADAM_CR 425..495 CDD:301627 12/69 (17%)
TSP1 512..564 CDD:214559 19/51 (37%)
ADAM_spacer1 674..793 CDD:283607 14/118 (12%)
TSP1 822..871 CDD:214559 13/53 (25%)
TSP1 873..915 CDD:214559 13/41 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.