DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF2 and RIA1

DIOPT Version :10

Sequence 1:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_014236.1 Gene:RIA1 / 855558 SGDID:S000005107 Length:1110 Species:Saccharomyces cerevisiae


Alignment Length:1099 Identity:316/1099 - (28%)
Similarity:475/1099 - (43%) Gaps:313/1099 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTRKDEQERCITIKSTAISMYFEVEE 83
            |||:.::|||||||::|:|||::..|||:...||:.||.|.|.|||.|.||::|:|||:||.|..
Yeast    19 IRNICIVAHVDHGKTSLSDSLLASNGIISQRLAGKIRFLDARPDEQLRGITMESSAISLYFRVLR 83

  Fly    84 KDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLR 148
            |      .....|......|:||||||||:||||||:||.|:.|||:|:||.|.|||.||.||||
Yeast    84 K------QEGSDEPLVSEHLVNLIDSPGHIDFSSEVSAASRLCDGAVVLVDVVEGVCSQTVTVLR 142

  Fly   149 QAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIVENVNVIIATY----------------- 196
            |...|::||||.:||:||.:.||||..:|.|....:::|.||.:|.::                 
Yeast   143 QCWTEKLKPILVLNKIDRLITELQLTPQEAYIHLSKVIEQVNSVIGSFFANERQLDDLFWREQLE 207

  Fly   197 ---------NDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYSEKFKIDVVKLMNRLWG 252
                     .||.|    :..:|:..:|.|.|.:.||.|.:.|.::.|.:|.......|...|||
Yeast   208 KNENAEYIEKDDSG----IYFNPTDNNVIFASAIDGWGFNIGQLAKFYEQKLGAKRENLQKVLWG 268

  Fly   253 ENFFNAKTKKWQKQKEADN---KRSFCMYILDPIYKVFDAIMNYKKEEIGTLLEKIGVTLK---- 310
            :.:.:.||||....|....   |..|...||:.|:|::..|:..:..|   ::|||..||.    
Yeast   269 DFYMDPKTKKIINNKGLKGRSLKPLFTSLILENIWKIYQNIITSRDSE---MVEKIAKTLNIKLL 330

  Fly   311 -HEDKDKDGKALLKTVMRTWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAI----- 369
             .:.:.||.|.||:|:|..|||...|:|..:...||||:.:|..|:..:... ..|.||:     
Yeast   331 ARDLRSKDDKQLLRTIMGQWLPVSTAVLLTVIEKLPSPLESQTDRLNTILVS-ESDTAAMDPRLL 394

  Fly   370 -AVKSCDPDGPLMMYISKM--------------VPTSD-------KGR----------------- 395
             |:|:||.:||:..|:|||              :.:||       |.|                 
Yeast   395 KAMKTCDKEGPVSAYVSKMLSIPREELPVESKRIASSDELMERSRKAREEALNAAKHAGMVENMA 459

  Fly   396 ----------------------------------------------------------------- 395
                                                                             
Yeast   460 MMDLNDNSKNTSDLYKRAKDTVMTPEVGEQTKPKPSRNNDVFCVVSEPSSALDLEFEYEGEDDSD 524

  Fly   396 ---------------------------------------------------------FYAFGRVF 403
                                                                     ..||.|::
Yeast   525 SQDNFGLDFVPTDIDPNDPLSSMFEYEEEDPLLESIKQISEDVNDEVDDIFDEKEECLVAFARIY 589

  Fly   404 AGKVATGQKCRIMGPNYTPGKKEDLYEKA-IQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVK 467
            :|.:..||:..::||.|.|...|:..|.| |....|.||:.:..::..|||||.|:.|:...::|
Yeast   590 SGTLRVGQEISVLGPKYDPKCPEEHIETAIITHLYLFMGKELVPLDVCPSGNIVGIRGLAGKVLK 654

  Fly   468 TGT-ITTFKDAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHI 531
            :|| |.......|:..:.|..:|:|||||||.||.::.|||.|||.|.::||.|...:|.:||||
Yeast   655 SGTLIEKGVQGVNLAGVNFHFTPIVRVAVEPANPVEMSKLVRGLKLLDQADPCVHTYVENTGEHI 719

  Fly   532 IAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESD--------------QMCLSKSP 582
            :..|||||||.|||||.|..|.|.:..|:|.:.||||....||              ::.||:  
Yeast   720 LCTAGELHLERCLKDLTERFAGIEITHSEPAIPYRETFLSASDMNPPQNSQLGRGVHELLLSQ-- 782

  Fly   583 NKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKAR------------ARYLSEK-----YDYDVT 630
               .::..:..|:...:.:.:.....|.|:..|..            :.:|.:|     ::..:.
Yeast   783 ---YKITFRTFPLSGKVTDFLSQHQNSIKNILKTSTSSMDPVIESTGSSFLDKKSLLVAFEEVIN 844

  Fly   631 EAR-----------KIWCFGPDGTGPNFILDCTKSVQYL-------NEIKDSVVAGFQWASKEGI 677
            :..           |:..|||...|.|.:|.....:..|       .|..||:..|||.|..||.
Yeast   845 QEEKSRELLSGFKVKLAGFGPSRVGCNILLSQDNLLGSLFEGTPAAFEYSDSIKNGFQLAVSEGP 909

  Fly   678 LADENLRGVRFNIYDVTLHADAIHRG--------------------GGQIIPTTRRCLYAAAITA 722
            ||:|.::|       :.:..:::|:.                    .|::|.:||..::.|.:..
Yeast   910 LANEPVQG-------MCVLVESVHKMSQDEIESIEDPRYQQHIVDLSGRLITSTRDAIHEAFLDW 967

  Fly   723 KPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLR 787
            .||:|..:|.|:||.....:|.:|.|:.:|.|.:..|....|||.|.::|::||.|:||.:.|:|
Yeast   968 SPRIMWAIYSCDIQTSVDVLGKVYAVILQRHGKIISEEMKEGTPFFQIEAHVPVVEAFGLSEDIR 1032

  Fly   788 SNTGGQAFPQCVFDHWQVLPGDP-----SEPSSKPYAIVQD-----------TRKRKGL 830
            ..|.|.|.||.||..::.:..||     :|...:......|           .|:||||
Yeast  1033 KRTSGAAQPQLVFSGFECIDLDPFWVPTTEEELEELGDTADRENIARKHMNAIRRRKGL 1091

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 316/1099 (29%)
RIA1NP_014236.1 PRK13351 1..1091 CDD:481252 314/1097 (29%)

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