DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF2 and MEF1

DIOPT Version :9

Sequence 1:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_013170.1 Gene:MEF1 / 850758 SGDID:S000004059 Length:761 Species:Saccharomyces cerevisiae


Alignment Length:889 Identity:217/889 - (24%)
Similarity:354/889 - (39%) Gaps:242/889 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VDEIR--------GLMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----------AGAKA 51
            ||||:        |..:|   :||:.:.||:|.||:|.|:.::.....|           .||| 
Yeast    52 VDEIKQKLTPDDIGRCNK---LRNIGISAHIDSGKTTFTERVLYYTKRIKAIHEVRGRDNVGAK- 112

  Fly    52 GETRFTDTRKDEQERCITIKSTAISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFS 116
                 .|:...|:|:.|||:|.|....:                :||.|.:..||||:|||:||:
Yeast   113 -----MDSMDLEREKGITIQSAATYCSW----------------DKEGKNYHFNLIDTPGHIDFT 156

  Fly   117 SEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPILFMNKMDR--------------- 166
            .||..||||.|||::||..||||..||.||.||.....:..:.|:|||||               
Yeast   157 IEVERALRVLDGAVLVVCAVSGVQSQTVTVDRQMRRYNVPRVTFINKMDRMGSDPFRAIEQLNSK 221

  Fly   167 -----ALLELQLDAEELYQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAF 226
                 |.:::.:.:|   .:...:|:.:| .:|.||.  |..||:   ..||.|         ..
Yeast   222 LKIPAAAVQIPIGSE---SSLSGVVDLIN-RVAIYNK--GDNGEI---IEKGPV---------PE 268

  Fly   227 TLKQFSEMYSEKFKIDVVKLMNRLWGENFFNAKTKKWQKQKEADNK----RSFCMYILDP----- 282
            .||...| ...:..|:.:..::....|.|...|....|:.|:|..:    |||...::..     
Yeast   269 NLKPLME-EKRQLLIETLADVDDEMAEMFLEEKEPTTQQIKDAIRRSTIARSFTPVLMGSALANT 332

  Fly   283 -IYKVFDAIMNY---KKEEIGTLLEKIGVTLKHEDKDKDGKALLKTVMRTWLPAGEALLQMIAIH 343
             |..|.|||::|   ..|.:.|.|:.         .:.:.|..|       :||           
Yeast   333 GIQPVLDAIVDYLPNPSEVLNTALDV---------SNNEAKVNL-------VPA----------- 370

  Fly   344 LPSPVVAQKYRMEMLYEGPHDDEAAIAVKSCDPDGPLMMYISKMVPTSDKGRFYAFGRVFAGKVA 408
            :..|.|...:::|   ||.:..               :.|:                ||:.|::.
Yeast   371 VQQPFVGLAFKLE---EGKYGQ---------------LTYV----------------RVYQGRLR 401

  Fly   409 TGQKCRIMGPNYTPGKKEDLYEKAIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 473
            .|...    .|...|||     ..:.|.:.|....:|.:::|.||.||...|:|     ..:..|
Yeast   402 KGNYI----TNVKTGKK-----VKVARLVRMHSSEMEDVDEVGSGEICATFGID-----CASGDT 452

  Fly   474 FKDA---HNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIE-ESGEHIIAG 534
            |.|.   ::|..| :....||.:::.| |..|.....:.|.|..|.||..:...: ||.|.||:|
Yeast   453 FTDGSVQYSMSSM-YVPDAVVSLSITP-NSKDASNFSKALNRFQKEDPTFRVKFDPESKETIISG 515

  Fly   535 AGELHLEICLKDLEEDH--ACIPLKKSDPVVSYRETVSEESD----QMCLSKSPNKHNRLLMKAL 593
            .|||||||.::.:..::  .|:..|   |.|||||:::..:|    ....|....::.|::....
Yeast   516 MGELHLEIYVERMRREYNVDCVTGK---PQVSYRESITIPADFDYTHKKQSGGAGQYGRVIGTLS 577

  Fly   594 PMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQYL 658
            |:     :||..|::                ::..:...|.     ||    .::..|.|     
Yeast   578 PV-----DDITKGNI----------------FETAIVGGRI-----PD----KYLAACGK----- 607

  Fly   659 NEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAK 723
                     ||:...::|.|....:..|:..|.|..:|  |:..........|......|.:.|:
Yeast   608 ---------GFEEVCEKGPLIGHRVLDVKMLINDGAIH--AVDSNELSFKTATMSAFRDAFLRAQ 661

  Fly   724 PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFE-ENQVVGTPMFVVKAYLPVNESFGFTADLR 787
            |.:|||:....:..|....|.:.|:||:.:..:.: ||   |...|.:||...::..|||...||
Yeast   662 PVIMEPIMNVSVTSPNEFQGNVIGLLNKLQAVIQDTEN---GHDEFTLKAECALSTMFGFATSLR 723

  Fly   788 SNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLK 831
            ::|.|:......|.|:.     |:.|..:. .::.:.:|::..|
Yeast   724 ASTQGKGEFSLEFSHYA-----PTAPHVQK-ELISEFQKKQAKK 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 217/889 (24%)
EF2 20..236 CDD:206672 76/246 (31%)
EF2_snRNP_like_II 380..474 CDD:293901 19/93 (20%)
EF2_snRNP_III 489..560 CDD:293918 25/73 (34%)
aeEF2_snRNP_like_IV 560..732 CDD:238839 34/175 (19%)
eEF2_snRNP_like_C 728..807 CDD:239763 22/79 (28%)
MEF1NP_013170.1 FusA 68..760 CDD:223556 211/870 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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