DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF2 and AT5G25230

DIOPT Version :9

Sequence 1:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_001318643.1 Gene:AT5G25230 / 832594 AraportID:AT5G25230 Length:973 Species:Arabidopsis thaliana


Alignment Length:864 Identity:333/864 - (38%)
Similarity:507/864 - (58%) Gaps:55/864 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GLMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKA---GETRFTDTRKDEQERCITIKS 72
            |||.....:||::::.|:.|||:...|.||.:...::...|   ...|:||||.|||||.|:||:
plant   116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERNISIKA 180

  Fly    73 TAISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVS 137
            ..:|:..|            |.|.   |.:|.|::|:||:|:||.|:||:||:.|||:.:||...
plant   181 VPMSLVLE------------DSRS---KSYLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQ 230

  Fly   138 GVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIVENVN--VIIATYNDDG 200
            ||.|.||..:|.||.:.:..::.:||:||.:.||:|...:.|...:..:|.:|  :..|:.|...
plant   231 GVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRYTIEVINNHISAASTNAAD 295

  Fly   201 GPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYSEKFKI--DVVKLMNRLWGENFFNAKTKKW 263
            .|:    :||:.|:|.|.||..||:|||:.|:.||::...:  ||.|..:||||:.:::..|:.:
plant   296 LPL----IDPAAGNVCFASGTAGWSFTLQSFARMYAKLHGVAMDVDKFASRLWGDVYYHPDTRVF 356

  Fly   264 QKQKE-ADNKRSFCMYILDPIYKVFDAIMNYKKEEIGTLLEKIGVTLKHEDKDKDGKALLKTVMR 327
            ..... ...:|:|..:||:|:||::..::...|:.:.|.|.::||||.:.....:.:.||:....
plant   357 NTSPPVGGGERAFVQFILEPLYKIYSQVIGEHKKSVETTLAELGVTLSNSAYKLNVRPLLRLACS 421

  Fly   328 TWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIAVKSCDPDGPLMMYISKMVPTSD 392
            :...:......|:..|:|||..|...:::..|.|..|.....::..|||.||||:.::|:.|.||
plant   422 SVFGSASGFTDMLVKHIPSPREAAARKVDHSYTGTKDSPIYESMVECDPSGPLMVNVTKLYPKSD 486

  Fly   393 KGRFYAFGRVFAGKVATGQKCRIMGPNYTPGKKEDLYEKAIQRTILMMGRYVEAIEDVPSGNICG 457
            ...|..||||::|::.|||..|::|..|:|..:||:..|.:.:..:...||...:...|.|:...
plant   487 TSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIKEVTKLWIYQARYRIPVSSAPPGSWVL 551

  Fly   458 LVGVDQFLVKTGTITTF---KDAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPM 519
            :.|||..::||.|:...   :|.:..:.:||:..|||:.|.||.||::|||:||||::::||.|:
plant   552 IEGVDASIMKTATLCNASYDEDVYIFRALKFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPL 616

  Fly   520 VQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESDQMCLSKSPNK 584
            ....:||||||.|.|.|||:|:..:|||.|.::.:.:|.:|||||:.|||.|.|...|.:::|||
plant   617 AITKVEESGEHTILGTGELYLDSIIKDLRELYSEVQVKVADPVVSFCETVVESSSMKCFAETPNK 681

  Fly   585 HNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIWCFGPDGTGPNFIL 649
            .|:|.|.|.|:..||.|||:||.||..........:...|||:|:..||.||.||||..|.|.:|
plant   682 KNKLTMIAEPLDRGLAEDIENGVVSIDWNRVQLGDFFRTKYDWDLLAARSIWAFGPDKQGTNILL 746

  Fly   650 DCTKSVQ----YLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPT 710
            |.|...:    .:..:|||:|.||||.::||.|.||.:|.|:|.|.|..:..:.:|||.||:|||
plant   747 DDTLPTEVDRNLMMGVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPT 811

  Fly   711 TRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLP 775
            .||..|:|.:.|.||||||||..|||.|...|..||.||:||||:|..:....|||.::|||:||
plant   812 ARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVTAIYTVLSRRRGYVTSDVPQPGTPAYIVKAFLP 876

  Fly   776 VNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGD---------PSEPS-----SKPYAIVQDTRK 826
            |.|||||..|||.:|.||||...|||||.::|||         |.||:     ::.:.:  .||:
plant   877 VIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMV--KTRR 939

  Fly   827 RKGLKEGLPDLS--QYLDK 843
            |||:.|   |:|  ::.|:
plant   940 RKGMSE---DVSGNKFFDE 955

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 333/864 (39%)
EF2 20..236 CDD:206672 81/220 (37%)
EF2_snRNP_like_II 380..474 CDD:293901 32/93 (34%)
EF2_snRNP_III 489..560 CDD:293918 35/70 (50%)
aeEF2_snRNP_like_IV 560..732 CDD:238839 83/175 (47%)
eEF2_snRNP_like_C 728..807 CDD:239763 45/78 (58%)
AT5G25230NP_001318643.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140796at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100212
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

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