DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF2 and efl1

DIOPT Version :9

Sequence 1:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster
Sequence 2:XP_697184.5 Gene:efl1 / 568741 ZFINID:ZDB-GENE-130103-6 Length:1133 Species:Danio rerio


Alignment Length:1119 Identity:339/1119 - (30%)
Similarity:517/1119 - (46%) Gaps:313/1119 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVNFTVDEIRGLMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTRKDEQE 65
            |.:.::::|..|..|..:|||:.::|||||||:||.|.||:..|||:...||:.|:.|:|:|||.
Zfish    19 MGHTSLEKIIALQKKTAHIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSREDEQI 83

  Fly    66 RCITIKSTAISMYFE---VEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTD 127
            |.||:||:|||::|.   ||                   ||||||||||||||||||:.|:|:.|
Zfish    84 RGITMKSSAISLHFATGGVE-------------------FLINLIDSPGHVDFSSEVSTAVRLCD 129

  Fly   128 GALVVVDCVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIVENVNVI 192
            ||:||||.|.|||.||:.|||||..|.|:|:|.:||:||.:.||:|.::|.|...|:|:|.||.:
Zfish   130 GAIVVVDAVEGVCPQTQVVLRQAWLENIRPVLVINKIDRLIAELKLTSQEAYVHLQKILEQVNAV 194

  Fly   193 IATY----------------------NDDGGPM------------GEVRVDPSKGSVGFGSGLHG 223
            ..|.                      |:.|..:            .::...|.:|:|.|.|.:.|
Zfish   195 TGTLFTSKVLEERAEKDAGSQSSFTENESGDHVYDWSAGLEETDDSDLYFSPDRGNVVFASAIDG 259

  Fly   224 WAFTLKQFSEMYSEKFKIDVVKLMNRLWGENFFNAKTKKWQKQKEADNKRS-FCMYILDPIYKVF 287
            |.|::.||:||||:|..|....|:..|||:.:.|||.||..|..::..|:. |..:|||.|:.::
Zfish   260 WGFSIHQFAEMYSQKMGIRSSVLLKTLWGDFYLNAKAKKIMKGAQSKGKKPLFVQFILDNIWSMY 324

  Fly   288 DAIMNYK-KEEIGTLLEKIGVTLKHED-KDKDGKALLKTVMRTWLPAGEALLQMIAIHLPSPVVA 350
            ||::..: ||::..::..:|:.:...| :..|.|.||..:...|||..:|:|.|:...||||...
Zfish   325 DAVVTRRDKEKVEKMMTSLGLKVMSRDLRHSDPKVLLSAICSQWLPLSQAVLSMVCEKLPSPAEI 389

  Fly   351 QKYRMEML-------YEGPHD--DEAAIAVKSCDPD--GPLMMYISKM----------------- 387
            ...|:|.|       ::...|  .|...|...|..|  .|:::::|||                 
Zfish   390 SAERVEKLMSVGARRFDSLPDKTQELKKAFLDCSADETAPVIVFVSKMFAVDSKALPQNKQRPLT 454

  Fly   388 --------------------------------------------------------------VPT 390
                                                                          |..
Zfish   455 HEEISQRRELARQRHAEKQAANQSAESLASGDAGGDSIPAPAAAGVTDALCAQTEALSVKTTVEE 519

  Fly   391 SDKGRFYAFGRVFAGKVATGQKCRIMGPNYTPG----------KKEDLYEK-------AIQRTIL 438
            .:|..|.||.||::|.|..|||..::||.|.|.          ...|:...       .:....|
Zfish   520 ENKEHFVAFARVYSGVVRKGQKVFVLGPKYDPSLALRALPEGCSVSDVLPSIPHMSYCTVDSLYL 584

  Fly   439 MMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKDAHNMKVMKFSVSPVVRVAVEPKNPADL 503
            :|||.:|.:::|||||:.|:.|::..::|:.||:|.........:.|..:|:||||||||:|:::
Zfish   585 LMGRELEELDEVPSGNVLGIGGLEDVILKSATISTSPACPPFTPLNFEATPIVRVAVEPKHPSEM 649

  Fly   504 PKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRET 568
            ||||.|:|.|.::||..:.:|:|:|||::..|||:||:.||.||.|..|.|.:..|.|::.:|||
Zfish   650 PKLVRGMKLLNQADPCAEVLIQETGEHVLVTAGEVHLQRCLDDLRERFAKIEISSSKPIIPFRET 714

  Fly   569 V---------------------------SEESDQMCLS---------KSPNKHNRLLMKALPMPD 597
            |                           .:..:..|:.         .:|||...:.::|:|:|:
Zfish   715 VVRPPRVDMVNEDLGKQQKVAVIHQVKEEQSKNPECVQVDSSGLVSLTTPNKMATVGVRAIPLPE 779

  Fly   598 G---LPED--------------IDNG---DVSAK-----DEFKAR--ARYLSEKYDYDVTEARKI 635
            .   |.||              :..|   |:|.|     .:||.:  :.....|:...|..   |
Zfish   780 QVTCLLEDNVELIRTMEQFNLSVREGKTLDISQKILDNIQDFKVKLESHLQGHKWRNAVDH---I 841

  Fly   636 WCFGPDGTGPNFILD------------CTKSVQ----YLNEIKDSVVAGFQWASKEGILADENLR 684
            |.|||...|||.:|:            |.::.:    .|.:..:|:.:|||.|:..|.:.:|.|.
Zfish   842 WAFGPRRCGPNILLNSIEGYRRPSVWQCLETEKTESSALRDFDNSIASGFQLATLAGPMCEEPLM 906

  Fly   685 GVRFNI--YDVTL-----HADAIHRG--------------------------------------G 704
            ||.|::  :|:.:     ..|::..|                                      .
Zfish   907 GVCFSVESWDMKISTPVAQQDSVDEGSQPAELNNEHSEVSPVSSSRSRSKAEAAGSSVDCYGPFS 971

  Fly   705 GQIIPTTRR-CLYAAAITAKP-RLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPM 767
            ||:|...:. |.|  |..||| |||..:|.|||......:|.:|.||::|.|.|.:|....||.|
Zfish   972 GQLIAAVKEACRY--AFQAKPQRLMAAMYTCEIMATAEVLGRVYAVLSKREGRVLQEEMKEGTDM 1034

  Fly   768 FVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP----------------SEPSSK 816
            |::||.|||.|||||..::|..|.|.|.||.:|.||:|:..||                ::.:::
Zfish  1035 FIIKAVLPVAESFGFADEIRKRTSGLASPQLIFSHWEVIGSDPFWVPTTEEEYLHFGEKADSTNQ 1099

  Fly   817 PYAIVQDTRKRKGL 830
            ....:...||||||
Zfish  1100 ALKYMNAVRKRKGL 1113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 339/1119 (30%)
EF2 20..236 CDD:206672 107/252 (42%)
EF2_snRNP_like_II 380..474 CDD:293901 35/189 (19%)
EF2_snRNP_III 489..560 CDD:293918 36/70 (51%)
aeEF2_snRNP_like_IV 560..732 CDD:238839 60/297 (20%)
eEF2_snRNP_like_C 728..807 CDD:239763 36/78 (46%)
efl1XP_697184.5 PTZ00416 19..1116 CDD:240409 339/1119 (30%)
EF2 38..272 CDD:206672 107/252 (42%)
EF2_II 523..620 CDD:293913 30/96 (31%)
EF2_snRNP_III 635..706 CDD:293918 36/70 (51%)
aeEF2_snRNP_like_IV 706..999 CDD:238839 60/297 (20%)
eEF2_snRNP_like_C 996..1073 CDD:239763 35/76 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140796at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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