DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF2 and mIF2

DIOPT Version :9

Sequence 1:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_651621.2 Gene:mIF2 / 43382 FlyBaseID:FBgn0039588 Length:696 Species:Drosophila melanogaster


Alignment Length:555 Identity:121/555 - (21%)
Similarity:204/555 - (36%) Gaps:179/555 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 MSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETR----FTDTRKDEQERCITIKSTAISMYFEVE 82
            ::|:.||||||:||.||| ..|.:.||...|.|:    ||          :|:::          
  Fly   165 VTVMGHVDHGKTTLLDSL-RGADVAAGEAGGITQHIGAFT----------VTLEN---------- 208

  Fly    83 EKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVL 147
                              |..:..:|:|||..||:........||..::||....||..||..|:
  Fly   209 ------------------GERVTFLDTPGHAAFSAMRARGAVATDIIVLVVAAEDGVMAQTREVI 255

  Fly   148 RQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSK 212
            :.|...::..|:.:||:|:....::....||.|....:.|:           ||.:..:.:...|
  Fly   256 QLAKEAQVPIIVALNKIDKPEANIEKSKRELAQMGLALEEH-----------GGDVQVIPISALK 309

  Fly   213 GSVGFGSGLHGWAFTLKQFSEMYSEK-----FKIDVVKLMNRLWGENFFNAKTKKWQKQKEADNK 272
            |:            .|:..:|..|.:     .|.|...|:..:..|:             :.|.:
  Fly   310 GT------------NLELLAEAVSTQATLMGLKADPTGLVEGIVVES-------------KTDPR 349

  Fly   273 RSFCMYILDPIYKVFDAIMNYKKEEIGTLLEKIGVTLKHEDK----DKDGKALLKTVMRT----- 328
            |.          |:..||::......|::|..   .|.|...    |.:|:.|.:....|     
  Fly   350 RG----------KLSTAIVSRGTLRKGSVLLS---GLAHAKVRGLFDHNGQPLSEAPPGTPVEIL 401

  Fly   329 -W--LP-AGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIAVKSCDPDGPLMMYISKMVP 389
             |  || ||:.:|:         |..:|....:|....|:.:.                 .|:..
  Fly   402 GWRELPLAGDLILE---------VETEKKAHAVLKYREHESQQ-----------------EKIES 440

  Fly   390 TSD-----------KGRFYAFGRVFAG--KVATGQKCRIMGPNYTPGKKEDLYEKAIQRTILMMG 441
            :||           |.|.....|..||  ::..||:.          |:.|..|...:.::::.|
  Fly   441 SSDEIRKKEEEHQAKYRAEREARRLAGRFRMRGGQRV----------KQVDENEGKPRVSVIIKG 495

  Fly   442 RY---VEAIEDV----PSGNICGL----VGVDQFLVKTGTITTFKDAHNMKVMKFSV-SPVVRVA 494
            ..   ||||.||    .|...|.|    .||..  |..|.:...|..|.: :..|:| :|.::.|
  Fly   496 DVHGSVEAILDVLETYNSNESCRLDIVHYGVGN--VTEGDLELAKAFHAI-IYAFAVETPQLKAA 557

  Fly   495 --VEPKNPADLPKLVEGLK-RLAKSDPMVQCIIEE 526
              |..::...:.:|::.|| :|:...|.|:  :||
  Fly   558 KEVNIRSYNIIYRLIDDLKEQLSSKLPPVE--VEE 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 121/555 (22%)
EF2 20..236 CDD:206672 51/217 (24%)
EF2_snRNP_like_II 380..474 CDD:293901 27/117 (23%)
EF2_snRNP_III 489..560 CDD:293918 11/41 (27%)
aeEF2_snRNP_like_IV 560..732 CDD:238839
eEF2_snRNP_like_C 728..807 CDD:239763
mIF2NP_651621.2 InfB 158..689 CDD:223606 121/555 (22%)
IF2_eIF5B 163..327 CDD:206674 52/223 (23%)
IF2_mtIF2_II 336..431 CDD:293903 24/129 (19%)
IF-2 482..575 CDD:288813 23/95 (24%)
mtIF2_IVc 593..680 CDD:293893
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464683
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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