DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF2 and eEF1alpha1

DIOPT Version :9

Sequence 1:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_001286321.1 Gene:eEF1alpha1 / 36271 FlyBaseID:FBgn0284245 Length:463 Species:Drosophila melanogaster


Alignment Length:586 Identity:121/586 - (20%)
Similarity:185/586 - (31%) Gaps:247/586 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII----------AGAKAGETRF-----TDTRKD 62
            |.|::...|:.||.|||.||||.|..|:.|.|.|          ...:.|:..|     .|..|.
  Fly     1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 65

  Fly    63 EQERCITIKSTAISMY-FEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVT 126
            |:||.|||.   |::: ||..:                  :.:.:||:|||.||...:.......
  Fly    66 ERERGITID---IALWKFETAK------------------YYVTIIDAPGHRDFIKNMITGTSQA 109

  Fly   127 DGALVVV-----DCVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIV 186
            |.|:::|     :..:|:....:|                  .:.|||...|..::|       :
  Fly   110 DCAVLIVAAGTGEFEAGISKNGQT------------------REHALLAFTLGVKQL-------I 149

  Fly   187 ENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYSEKFKIDVVKLMNRL- 250
            ..||                ::|.|:                ..:||...|:.|.:|...:.:: 
  Fly   150 VGVN----------------KMDSSE----------------PPYSEARYEEIKKEVSSYIKKIG 182

  Fly   251 -------------W-GENFFNAKT-----KKW---QKQKEADNKRSFCMYILDPIYKVFDAIMN- 292
                         | |:|.....|     |.|   :|:..||.|.     ::|.:    |||:. 
  Fly   183 YNPAAVAFVPISGWHGDNMLEPSTNMPWFKGWKVERKEGNADGKT-----LIDAL----DAILPP 238

  Fly   293 ---------------YKKEEIGTLLEKIGVTLKHEDKDKDGKALLKTVMRTWLPAGE---ALLQ- 338
                           ||...|||                             :|.|.   .:|: 
  Fly   239 ARPTDKALRLPLQDVYKIGGIGT-----------------------------VPVGRVETGVLKP 274

  Fly   339 -MIAIHLPSPVVAQKYRMEM----LYEGPHDDEAAIAVKSCDPDGPLMMYI---SKMVPTSDKGR 395
             .:.:..|:.:..:...:||    |.|....|.....||:.........|:   ||..|......
  Fly   275 GTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKANPPKGAAD 339

  Fly   396 FYAFGRVF--AGKVATGQKCRIMGPNYTP----------GKKEDLYEKAIQRTILMMGRYVE--- 445
            |.|...|.  .|::|.|         |||          .|..::.||..:|:    |:..|   
  Fly   340 FTAQVIVLNHPGQIANG---------YTPVLDCHTAHIACKFAEIKEKVDRRS----GKTTEENP 391

  Fly   446 ---------AIEDVPSGNICGLVGVDQF----------------LVKTGTI--TTFKDAHNMKVM 483
                     .:..|||..:|    |:.|                .|..|.|  ..||||...||.
  Fly   392 KFIKSGDAAIVNLVPSKPLC----VEAFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKDASGGKVT 452

  Fly   484 K 484
            |
  Fly   453 K 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 121/586 (21%)
EF2 20..236 CDD:206672 51/236 (22%)
EF2_snRNP_like_II 380..474 CDD:293901 28/138 (20%)
EF2_snRNP_III 489..560 CDD:293918
aeEF2_snRNP_like_IV 560..732 CDD:238839
eEF2_snRNP_like_C 728..807 CDD:239763
eEF1alpha1NP_001286321.1 PTZ00141 1..457 CDD:185474 121/586 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464627
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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