DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF2 and mEFG1

DIOPT Version :10

Sequence 1:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster


Alignment Length:849 Identity:208/849 - (24%)
Similarity:336/849 - (39%) Gaps:182/849 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGA-------KAGETRFTDTRKDEQERCITIKSTAIS 76
            |||:.:.||:|.||:|||:.::...|.||..       ..|.|  .|:.:.|::|.|||:|.|..
  Fly    42 IRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGAT--MDSMELERQRGITIQSAATY 104

  Fly    77 MYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCV 141
            ..:                    |...||:||:||||||:.||..||||.|||::|:..|.||..
  Fly   105 TLW--------------------KDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQS 149

  Fly   142 QTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIVENVNVIIATYNDDGGPMGEV 206
            ||.||.||.....:..:.|:||:||.       ....|:...::...:|...|......|.....
  Fly   150 QTLTVNRQMKRYNVPCLAFINKLDRL-------GSNPYRVLSQMRSKMNHNAAFIQLPIGVESNC 207

  Fly   207 R--VDPSKGSVGFGSGLHGWAFTLKQF-SEMYSEKFK-----IDVVKLMNRLWGENFFNAKTKKW 263
            :  ||..:....:..|.||....|.:. .:|..|..:     |:.:...:...||.|...|....
  Fly   208 KGIVDLVREKAIYFEGEHGMDIRLDEIPQDMRVESLERRQELIEHLSNADETLGELFLEEKPFTE 272

  Fly   264 QKQKEADNKRSFCMYILDPIYKVFDAIMNYKKEEIGTLLEKIGVTLKHEDKDKDGKALLKTVMRT 328
            ...|.|  .|..|      |.:.|..::      :||.|:..||                     
  Fly   273 DDIKAA--LRRTC------INRTFTPVL------VGTALKNKGV--------------------- 302

  Fly   329 WLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIAVKSCDPDGPLMMYISKMVPTSDK 393
                 :.||..:..:||:|  .:...:..:.:...|.|..:...:.|...|.:....|:    :.
  Fly   303 -----QPLLDAVLDYLPNP--GEVENLGFIEKEGQDPEKVVLNPARDGKDPFVGLAFKL----EA 356

  Fly   394 GRF--YAFGRVFAGKVATGQKCRIMGPNYTPGKKEDLYEKAIQRTILMMGRYVEAIEDVPSGNIC 456
            |||  ..:.|.:.|.:..|....    |....||     ..|.|.:.:....:|.:.:|.:|:|.
  Fly   357 GRFGQLTYLRCYQGVLRKGDNIF----NARTNKK-----VRIARLVRLHSNQMEDVNEVYAGDIF 412

  Fly   457 GLVGVDQFLVKTGTITTFKDAHNMKVMK-FSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMV 520
            .|.|||   ..:|...|....:|:.:.. |...|||.:|::|.|..|.....:.:.|..|.||..
  Fly   413 ALFGVD---CASGDTFTTNPKNNLSMESIFVPEPVVSMAIKPNNTKDRDNFSKAIARFTKEDPTF 474

  Fly   521 QCIIE-ESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESDQMCLSKSPNK 584
            ....: :..|.:::|.|||||||..:.:|.::.| |:....|.|::|||:..             
  Fly   475 HFFFDNDVKETLVSGMGELHLEIYAQRMEREYGC-PVTLGKPKVAFRETLVG------------- 525

  Fly   585 HNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTE-ARKIWCFGPDGTGPNFI 648
                           |.:.|               ||.:|......: ||.|....|.....|.:
  Fly   526 ---------------PCEFD---------------YLHKKQSGGSGQYARIIGVMEPLPPNQNTL 560

  Fly   649 L---DCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPT 710
            |   |.|.......:....|..|::..:::|:|:...|.|:||.:.|          ||..|:.:
  Fly   561 LEFVDETVGTNVPKQFVPGVEKGYREMAEKGMLSGHKLSGIRFRLQD----------GGHHIVDS 615

  Fly   711 TRRCLYAAAITA--------KPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPM 767
            :......||..|        ..:::||:.|.|:..||...|.:.|.|::|.|.:.......|  .
  Fly   616 SELAFMLAAHGAIKEVFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEG--W 678

  Fly   768 FVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKE 832
            |.|.|.:|:|:.||:..:|||:|.|:.  :...::.:..|..|.....    ||:..::.:||.:
  Fly   679 FTVYAEVPLNDMFGYAGELRSSTQGKG--EFTMEYSRYSPCLPDVQDQ----IVRQYQESQGLAQ 737

  Fly   833 GLPD 836
              ||
  Fly   738 --PD 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 208/849 (24%)
mEFG1NP_609105.1 FusA 38..731 CDD:440248 204/837 (24%)

Return to query results.
Submit another query.