DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF2 and ria1

DIOPT Version :10

Sequence 1:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_587766.1 Gene:ria1 / 2539293 PomBaseID:SPCC553.08C Length:1000 Species:Schizosaccharomyces pombe


Alignment Length:996 Identity:323/996 - (32%)
Similarity:500/996 - (50%) Gaps:192/996 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DEIRGLMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTRKDEQERCITIK 71
            :::..|...:.||||.:::|||||||:||.|||::..|||:...||..||.|.|:||..|.||:|
pombe     7 EKLVSLQKNQENIRNFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMK 71

  Fly    72 STAISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCV 136
            |:|||::|:|       |:..|::..| |.:|||||||||||||||||::|.|:.|||.|:||.|
pombe    72 SSAISLFFKV-------ISQNDEKRVE-KDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAV 128

  Fly   137 SGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIVENVNVIIATY----- 196
            .|||.||.||||||..:|||.||.:|||||.:.||:|...|.:....|:||.||.:|.|:     
pombe   129 EGVCSQTITVLRQAWIDRIKVILVINKMDRLITELKLSPIEAHYHLLRLVEQVNAVIGTFYTGEL 193

  Fly   197 ----------NDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYSEKFKIDVVKLMNRLW 251
                      :|:|     :...|.:|:|.|.|...||||.|.||||.|.:|..:....|...||
pombe   194 MQLADNDEVISDEG-----IYFAPEQGNVVFASAYDGWAFCLDQFSEFYEKKLGLKQKALTKCLW 253

  Fly   252 GENFFNAKTKKWQKQKEADNKR---SFCMYILDPIYKVFD-AIMNYKKEEIGTLLEKIGV-TLKH 311
            |:.:.:.|||:..:.|....:|   .|..::|:.::.|:: |:.|...|.|..:::.:.: .|..
pombe   254 GDYYLDPKTKRVLQPKHLQGRRLKPMFVQFVLENLWAVYESAVSNRNLENIEKIIKALNIKVLPR 318

  Fly   312 EDKDKDGKALLKTVMRTWLPAGEALLQMIAIHLPSPVVAQKYR-MEMLYEGPH----DDEAAIAV 371
            :.|.||.:.||..:.:.|||...|:|......:|||:.||..| .::|...||    |.:..:|:
pombe   319 DIKSKDPRNLLLAIFQQWLPLSTAILLTAIREIPSPINAQANRARKVLSSTPHYEMIDPDITLAM 383

  Fly   372 KSCD--PDGPLMMYISKMVPTS------------------------------------------- 391
            :|||  .:.|:::||||||..|                                           
pombe   384 ESCDASKEQPVLVYISKMVAFSERDLPNHRRKQLSAEEMKLIRSKLSESIESGINTISIEENVSS 448

  Fly   392 ---------------DKGRFYAFGRVFAGKVATGQKCRIMGPNYTPGKKEDLYEK-AIQRTILMM 440
                           ||.....|.|:::|.::.||:..:.||.|.|...|....| .::...|||
pombe   449 TNSDNLEGSTTDMDDDKDILIGFARIYSGTISVGQEVYVYGPKYDPVNPEKHITKVTVESLYLMM 513

  Fly   441 GRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKDAHNMKVMKFSVSPVVRVAVEPKNPADLPK 505
            |:.:..:|.||:||:..:.|:...:::|.|:.:..:..|:..:...:.|:||||:||..|.::.|
pombe   514 GQELVYLETVPAGNVFAIGGLAGTVLRTATLCSSPNGPNLVGVTQQMEPIVRVALEPVRPFEMNK 578

  Fly   506 LVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVS 570
            ||.||..|.::||.||..:||:|||:|..|||:|||.|||||.|..|.|.::.|.|:|.||||..
pombe   579 LVTGLDMLNQADPCVQIAVEENGEHVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVPYRETTI 643

  Fly   571 EESDQMCLSKSPN-------------------------------KHNRLL----------MKALP 594
            ...|.:..:|..:                               ||::.:          .:.:.
pombe   644 ATPDLLAKNKELSIGFVTATLPVGGVTIGITVTPLSGSVVDFLLKHSKTIENVSSNFSKKNRNVV 708

  Fly   595 MPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEAR----KIWCFGPDGTGPNFILDCTKSV 655
            :.:.|.:.::  :|...::|..|...|.|:.:.|:.|.:    .|..|||...|||.:.|.||.:
pombe   709 VSESLTKSME--EVLTPEKFYERLSKLLEEENSDLGELKNHLDSIIAFGPKRVGPNILFDKTKKM 771

  Fly   656 QYL-----------NEIKDSVVAGFQWASKEGILADENLRGV-----RFNIYD-------VTLHA 697
            :..           :::.:.||..||..:.:|.|..|.::|:     :|:|.|       :|::.
pombe   772 RDFRRQSDETKLIPSDLSEYVVTAFQLITHQGPLCAEPVQGICVSIDQFDISDDSEDSKLLTINN 836

  Fly   698 DAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQV 762
            ..|   .||:|...:..:....:...||||..:|.|::|.....:|.:|||:::|||.|.:|...
pombe   837 PQI---PGQVISVVKESIRHGFLGWSPRLMLAMYSCDVQATSEVLGRVYGVVSKRRGRVIDEEMK 898

  Fly   763 VGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP----------------- 810
            .|||.|:|||.:||.|||||..::...|.|.|:||.:|..:::|..:|                 
pombe   899 EGTPFFIVKALIPVVESFGFAVEILKRTSGAAYPQLIFHGFEMLDENPFWVPTTEEELEDLGELA 963

  Fly   811 -SEPSSKPYAIVQDTRKRKGL 830
             .|..:|.|.:  :.||||||
pombe   964 DRENIAKRYML--NVRKRKGL 982

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 323/996 (32%)
ria1NP_587766.1 PRK13351 1..985 CDD:481252 323/996 (32%)

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