DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF2 and Eftud2

DIOPT Version :9

Sequence 1:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_001103465.1 Gene:Eftud2 / 20624 MGIID:1336880 Length:972 Species:Mus musculus


Alignment Length:868 Identity:331/868 - (38%)
Similarity:511/868 - (58%) Gaps:56/868 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FTVDEIRGLMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETR--------FTDTR 60
            :.:|.:..|||....|||:::..|:.|||:...|.|:.:.       ..|.|        :||..
Mouse   114 YEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQT-------HPEIRKRYDQDLCYTDIL 171

  Fly    61 KDEQERCITIKSTAISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRV 125
            ..||||.:.||||.::            :..||.:.   |.:|.|::|:||||:||.||||.||:
Mouse   172 FTEQERGVGIKSTPVT------------VVLPDTKG---KSYLFNIMDTPGHVNFSDEVTAGLRI 221

  Fly   126 TDGALVVVDCVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIVENVN 190
            :||.::.:|...||.:.||.:::.|:.||:...:.:||:||.:|||:|...:.|...:.||:.||
Mouse   222 SDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVN 286

  Fly   191 VIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYSEKF-KIDVVKLMNRLWGEN 254
            .:|:.|:.|    ..:.:.|..|:|.|.|..:...|||..|:::|::.| .|:..:...||||:.
Mouse   287 GLISMYSTD----ENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDI 347

  Fly   255 FFNAKTKKW-QKQKEADNKRSFCMYILDPIYKVFDAIMNYKKEEIGTLLEKIGVTLKHEDKDKDG 318
            :||.||:|: :|...:.::|||..:||:|:||:...::......:...|:::|:.|..|:...:.
Mouse   348 YFNPKTRKFTKKAPSSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNI 412

  Fly   319 KALLKTVMRTWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIAVKSCDPDGPLMMY 383
            :.||:.|.:.:.......:.|...|:|||.|..|.::|..|.|..|.:...|:..||||||||.:
Mouse   413 RPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCH 477

  Fly   384 ISKMVPTSDKGRFYAFGRVFAGKVATGQKCRIMGPNYTPGKKEDLYEKAIQRTILMMGRYVEAIE 448
            .:||..|.|..:|:|||||.:|.:..||..:::|.|||...:||.....:.|..:.:.||...:.
Mouse   478 TTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVN 542

  Fly   449 DVPSGNICGLVGVDQFLVKTGTITT---FKDAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGL 510
            .||:||...:.||||.:|||.|||.   .::|...:.:||:.:.|:::||||.||::|||:::||
Mouse   543 RVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGL 607

  Fly   511 KRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESDQ 575
            :::.||.|.:...:||||||:|.|.|||:|:..:.||.:.::.|.:|.:||||::.|||.|.|..
Mouse   608 RKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSL 672

  Fly   576 MCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIWCFGP 640
            .|.:::|||.|::.|.|.|:..||.|||:|..|......|....:...|||:|:..||.||.|||
Mouse   673 KCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGP 737

  Fly   641 DGTGPNFILDCTKSVQ----YLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIH 701
            |.||||.::|.|...:    .|..:|||:|.||||.::||.|.||.:|.|:|.|.|..:..:.:|
Mouse   738 DATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLH 802

  Fly   702 RGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTP 766
            |||||||||.||.:|:|.:.|.||||||.|..|:|.|...|..:|.||.||||||.::..:.|:|
Mouse   803 RGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSP 867

  Fly   767 MFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGD---------PSEPSSKPY---A 819
            ::.:||::|..:||||..|||::|.||||...||.|||::|||         |.||...|:   .
Mouse   868 LYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLARE 932

  Fly   820 IVQDTRKRKGLKEGLPDLSQYLD 842
            .:..||:||||.|.: .:|::.|
Mouse   933 FMIKTRRRKGLSEDV-SISKFFD 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 331/868 (38%)
EF2 20..236 CDD:206672 73/223 (33%)
EF2_snRNP_like_II 380..474 CDD:293901 38/96 (40%)
EF2_snRNP_III 489..560 CDD:293918 31/70 (44%)
aeEF2_snRNP_like_IV 560..732 CDD:238839 83/175 (47%)
eEF2_snRNP_like_C 728..807 CDD:239763 38/78 (49%)
Eftud2NP_001103465.1 EFTUD2 4..110 CDD:318261
GTP_EFTU 122..954 CDD:332590 329/858 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140796at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100212
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.720

Return to query results.
Submit another query.