DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF2 and efl1

DIOPT Version :9

Sequence 1:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster
Sequence 2:XP_002940146.3 Gene:efl1 / 100492738 XenbaseID:XB-GENE-5894854 Length:1136 Species:Xenopus tropicalis


Alignment Length:1137 Identity:338/1137 - (29%)
Similarity:518/1137 - (45%) Gaps:336/1137 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TVDEIRGLMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTRKDEQERCIT 69
            ::::|..|..:..||||:.::|||||||:||.|.|:|..|||:...||:.|:.|:|:|||.|.||
 Frog     5 SLEKIVTLQKRAANIRNICILAHVDHGKTTLADCLISSNGIISNRLAGKLRYLDSREDEQIRGIT 69

  Fly    70 IKSTAISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVD 134
            :||:|||::::.:|::                :|||||||||||||||||:.|:|:.||.::|||
 Frog    70 MKSSAISLHYKDDEEE----------------YLINLIDSPGHVDFSSEVSTAVRLCDGCIIVVD 118

  Fly   135 CVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIVENVNVI------- 192
            .|.|||.||:.|||||..|.|:|:|.:||:||.:.||:|...|.|...|:|:|.||.:       
 Frog   119 SVEGVCPQTQAVLRQAWLENIRPVLVINKIDRLITELKLSCLEAYSHLQKILEQVNAVTGSLFTS 183

  Fly   193 --------------IATYNDDGGPM------------GEVRVDPSKGSVGFGSGLHGWAFTLKQF 231
                          :.:...||..:            ..:...|.:|:|.|.|.:.||.||:..|
 Frog   184 KVLEERAEKDMASDVPSETVDGDQVYDWSAGLEETDDSHLYFSPDQGNVVFASAIDGWGFTIDHF 248

  Fly   232 SEMYSEKFKIDVVKLMNRLWGENFFNAKTKKWQKQKEADNKRS-FCMYILDPIYKVFDAIMNYKK 295
            :::||:|..|....|:..|||:.:.|.|.||..|..::..|:. |...|||.::.::||::..:|
 Frog   249 AQLYSQKVGIKAAVLLKTLWGDYYLNTKAKKIMKGAQSKGKKPLFVQLILDNLWSLYDAVIKREK 313

  Fly   296 EEIGTLLEKIGVTLK-HEDKDKDGKALLKTVMRTWLPAGEALLQMIAIHLPSPVVAQKYRMEML- 358
            |:|..::..:|:.:. .|.:..|.|..:..:...|||..:|:|.|:...||||:.....|:|.| 
 Frog   314 EKIDKIVLSLGLKISPRESRHSDPKVHVNAICSQWLPISQAVLSMVCRKLPSPLDIPAERVEKLL 378

  Fly   359 -----------YEGPHDDEAAIAVKSCDPDGPLMMYISKM------------------------- 387
                       .|.....|..:..:| |...|:::::|||                         
 Frog   379 CVGSRRFDSLPQETQQLKETFLKCRS-DETAPVIIFVSKMFAVDAKALPQNKQRPLTQEEIALRR 442

  Fly   388 ----------------------VPTS----------------------------------DKGRF 396
                                  ||:|                                  :|..|
 Frog   443 ELARQRHAEKMAINQEQLPAEQVPSSNECEMPANKENTKGDKQTSHRDPEVVKPEKQEAENKSYF 507

  Fly   397 YAFGRVFAGKVATGQKCRIMGPNYTPGKKEDLYEKAIQRT-------------------ILMMGR 442
            .||.|||:|.|..|||..::||.|.|.  |.|.:..:..|                   .|:|||
 Frog   508 IAFARVFSGIVRRGQKIFVLGPKYDPA--ETLLKLPLNCTPACDLPGIPHMACCSLDNLYLLMGR 570

  Fly   443 YVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKDAHNMKVMKFSVSPVVRVAVEPKNPADLPKLV 507
            .:|.:|:||.||:.|:.|:::|::|:.|::|.........:.|..:|:||||||||:|:::|:||
 Frog   571 ELENLEEVPVGNVLGIGGLEEFVLKSATLSTSPACPPFIPLNFEATPIVRVAVEPKHPSEMPQLV 635

  Fly   508 EGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRET---- 568
            :|:|.|.::||.|:.:|:|:|||::..|||:||:.||.||.|..|.|.:..|.|::.:|||    
 Frog   636 KGMKLLNQADPCVEVLIQETGEHVLITAGEVHLQRCLDDLRERFAKIQVSSSAPIIPFRETIIRP 700

  Fly   569 -----VSEE---------------------------SDQMCLSKSPNKHNRLLMKALPMPDGLPE 601
                 |:||                           .|.:....:|||...|.::|:|:|:.:.:
 Frog   701 PKVDMVNEEIGKQQKIAVIHQVKEEQSKCPEGVQVDPDGLVTLTTPNKLATLSVRAMPLPEEVTQ 765

  Fly   602 DID-NGDVSAKDE-------------------------FKARARYLSEKYDYDVTEARKIWCFGP 640
            .:: |.|:....|                         ||:..:.|.:...:. ....:||.|||
 Frog   766 LLEKNSDLIRTMEQINMALNEGSYTIHFNESAIERITAFKSNLQQLLQGRRWR-NAVDQIWSFGP 829

  Fly   641 DGTGPNFILD------------C-TKSV---QYLNEIKDSVVAGFQWASKEGILADENLRGVRFN 689
            ...|||.:|:            | .||:   :|.| ..:|:|:|||.|:..|.:.:|.|.||.|.
 Frog   830 RRYGPNILLNRIEGYDRPSVWQCLEKSIREGKYRN-FDNSIVSGFQLATLAGPMCEEPLMGVCFI 893

  Fly   690 IYDVTL-----------------------HADAIHRG---------------------------- 703
            :..:.|                       |::....|                            
 Frog   894 VEKLDLSRPLLAKDSASQDSEVDTRTEPEHSETGTTGTTGALINNISTSATEETELIPENGARPF 958

  Fly   704 ---------------GGQIIPTTRR-CLYAAAITAKP-RLMEPVYLCEIQCPEVAVGGIYGVLNR 751
                           .||:|.|.:. |.||..:  || |||..:|.|||......:|.:||||::
 Frog   959 SKRKGDLLTDCYGPFSGQLIATMKEACRYAFQV--KPQRLMAAMYTCEIMATAEVLGRVYGVLSK 1021

  Fly   752 RRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP------ 810
            |.|.|..|....||.||::||.|||.|||||..::|..|.|.|.||.||.||:|:..||      
 Frog  1022 REGRVLLEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVISSDPFWVPTT 1086

  Fly   811 ------------SEPSSKPYAIVQDTRKRKGL 830
                        ||..::.|  :...||||||
 Frog  1087 EEEYLHFGEKADSENQARKY--MNSVRKRKGL 1116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 338/1137 (30%)
EF2 20..236 CDD:206672 99/248 (40%)
EF2_snRNP_like_II 380..474 CDD:293901 40/193 (21%)
EF2_snRNP_III 489..560 CDD:293918 36/70 (51%)
aeEF2_snRNP_like_IV 560..732 CDD:238839 62/317 (20%)
eEF2_snRNP_like_C 728..807 CDD:239763 38/78 (49%)
efl1XP_002940146.3 FusA 5..1119 CDD:357662 338/1137 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140796at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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