DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul2 and AT1G59790

DIOPT Version :10

Sequence 1:NP_610117.1 Gene:Cul2 / 35420 FlyBaseID:FBgn0032956 Length:753 Species:Drosophila melanogaster
Sequence 2:NP_176188.1 Gene:AT1G59790 / 842272 AraportID:AT1G59790 Length:374 Species:Arabidopsis thaliana


Alignment Length:395 Identity:85/395 - (21%)
Similarity:174/395 - (44%) Gaps:68/395 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KPKIVEFVDVWPRLRCIAESVITLTKVERSVWNTSF---------SDVYTLCVAQPEPMADRLYG 59
            :|:.::|.:.|..   |.:.:..|.::.......:|         :.:|.:|| |....:.:||.
plant     8 RPRQIKFEEGWSN---IQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCV-QRSDYSQQLYE 68

  Fly    60 ETKHFLEQH-VQEMLAKKVLIEGECSHSNGGPDLLQRYYITWMEYSQGIKYLHQLYIYLNQQHIK 123
            :.:..:|.: :|.:|..  |.|   .|..   |:|:.....|..:...:|:|.:.::|:::..::
plant    69 KYRKVIEDYTIQTVLPS--LRE---KHDE---DMLRELVKRWNNHKIMVKWLSKFFVYIDRHLVR 125

  Fly   124 KQKITDTESFYGNLSSDAAEQMEIGELGLDIW-RLYMIEYLSS------ELVRHILEGIAADRAS 181
            :.||...               .:.|:||..: .|...|..|:      .|:....||...||| 
plant   126 RSKIPIP---------------SLDEVGLTCFLDLVYCEMQSTAKEVVIALIHKEREGEQIDRA- 174

  Fly   182 NGTLDHHRVQIINGVIHSFVEVQDYKKTGSLKLYQELFEGPMLEASGAYYTDEANKLLHRCSVSE 246
                      ::..|:..:||    ...|:|:.|:|.||..||:.:.:||:.:|::.....|..:
plant   175 ----------LVKNVLDIYVE----NGMGTLEKYEEDFESFMLQDTASYYSRKASRWTEEDSCPD 225

  Fly   247 YMQEVIRILEYESRRAQKFLHVSSLPKLRKECEEKFI----NDRLGFIYSECREMVSEERRQDLR 307
            ||.:|...|:.|..|...:||..:.|||.::.:.:.:    .:||...:|....::.::::.||.
plant   226 YMIKVEECLKMERERVTHYLHSITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDDKKNDLS 290

  Fly   308 NMYVVLKPIPDNLKSELITTFLDHIKSEGLQTVSALKGENIHIAFVENMLKVHHKYQELIADVFE 372
            .:|.:..|||..| ..:...|..||..||...:.....:..:    :.::::|:|:...:.:.|:
plant   291 RIYRLYLPIPKRL-GRVADLFKKHITEEGNALIKQADDKTTN----QLLIELHNKFIVYVIECFQ 350

  Fly   373 NDSLF 377
            |.:||
plant   351 NHTLF 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul2NP_610117.1 Cullin 14..652 CDD:459983 83/385 (22%)
Cullin_Nedd8 683..745 CDD:463146
AT1G59790NP_176188.1 Cullin 18..>357 CDD:459983 83/385 (22%)
Blue background indicates that the domain is not in the aligned region.

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