Protein Alignment Cul2 and Cul6

DIOPT Version :9

• Sequence 1: NP_610117.1
• Gene: Cul2 / 35420
• FlyBaseID: FBgn0032956
• Length: 753
• Species: Drosophila melanogaster
• Sequence 2: NP_648620.1
• Gene: Cul6 / 39474
• FlyBaseID: FBgn0036332
• Length: 670
• Species: Drosophila melanogaster
• Alignment Length: 685
• Identity: 146/685 - (21%)
• Similarity: 273/685 - (39%)
• Gaps: 137/685 - (20%)

  Fly    92 LLQRYYITWMEYSQGIKYLHQLYIYLNQQHIKKQKITDTESFYGNLSSDAAEQMEIGELGLDIWR 156
            |:.:|...|:.|.:..:.|:....:.|:..::::::...:..|                  .|:|
  Fly    99 LIAKYLEHWVPYQRSCEKLNLACYHFNRNWVERERLKGDKETY------------------PIYR 145

  Fly   157 LYMIEYLSSELV-----------RHILEGIAADRASNGTLDHHRVQIINGVIHSFVEVQDYKKTG 210
            |.||.:  .|||           |.||..:  .|..|.:|::...|::..::..:...:
  Fly   146 LAMISW--KELVFEPSVTILAAIRLILSQM--PREYNKSLEYQVYQVLQSIVELYANDK------ 200

  Fly   211 SLKLYQELFEGPMLEASGAYYTDEANKLLHRCSVSEYMQEVIRILEYESRRAQKFLHVSSLPKLR 275
                ||::.....::   ..:|::........::.|:.:.|:      |...:.|.|
  Fly   201 ----YQDVSLPSRID---KIFTEKVMDFYKSTTLHEFQKIVV------SNDYKDFKH-------- 244

  Fly   276 KECEEKFINDRLGFIYSECREMVSEERRQDLRNMYVVLKPIPDNLKSELITTFLDHIKSEGLQTV 340
                         |:...|..|...|.....:   .:||        ..:...|...:..|...:
  Fly   245 -------------FLRYACLAMPEIENGTQFK---AILK--------RYLAARLQETRLSGKDYI 285

  Fly   341 SALKGENIHIAFVENMLKVHHKYQELIADVFENDSLFLSALDKACASVINRRPTERQPCRSAEYV 405
            .|..|  :....::..|:.|.|..|::              |..|...|||:.....|.|   .:
  Fly   286 QAFLG--LCRGPLQRALRDHTKLAEVV--------------DAVCKEEINRKGQIIDPTR---LL 331

  Fly   406 AKYCDTLLKKSKTCEAEIDQKLTNNITIFKYIEDKDVYQKFYSRLLAKRLIHEQSQSMDAEEGMI 470
            ..|.:.|:.|.:..|..|..:|...:...:::.|:..:...|.:.|..|.|:|.|.|...|..|.
  Fly   332 VTYANELMTKRQESEEAIIDELKRIVKCVEFLSDEYKFIDMYLKALRIRQINETSTSDGVESIMY 396

  Fly   471 NRLKQACGYEFTNKLHRMFTDISVSVDLNNKFNTHLKDSNVDLGINLAIKVLQAGAWPLGSTQVI 535
            :.|.:......|..::....|:.....|..:|..||....:.||.:...|..:..    ||.:..
  Fly   397 SLLNKKMANFVTRCIYVQLRDVDKLRTLKKEFQDHLNSKGIKLGFDFRPKCFKND----GSFENF 457

  Fly   536 PFAVPQEFEKSIKMFEDYY--HKLFSGRKLTWLHHMCHGELKLSHLKKS-YIVTMQTYQMAIILL 597
            ...:|.|.:::.|.|..:|  .||.|...:...:.:..||: ..||.:| ||:.:.|.|||:::|
  Fly   458 NLTLPDELQQAWKEFRIFYEARKLQSKAIIQLNNELSSGEI-TCHLNQSVYILEVSTLQMAVLML 521

  Fly   598 FETCDSLSCREIQNTLQLNDETFQKHMQPI-----IESKLLNASSENLAGETRIELNLDYTNKRT 657
            |...:..:.:|:...|.:..||.|:.::.|     ||...:|          .||:|:|:||::.
  Fly   522 FNRHERFTEQELVTALGVELETLQEALKQIKFLVYIEVNKVN----------YIEINMDFTNRKR 576

  Fly   658 KFKISSALQK-----ETPQEVEHTINSVDEDRKLFLQAAIVRIMKARKVLKHNALIQEVLSLSKV 717
            :...:..|.:     |...|:|..|.   .|::  :.||||||||.:|.|:::.||..|....|.
  Fly   577 RLFCNEPLPRKMRKIEEKSEIELKIR---RDKQ--VDAAIVRIMKGQKQLEYSELISLVYEELKD 636

  Fly   718 SFTPNIAMIKKCVESLIDKQYIERTANSGDEYSYM 752
            ...|.::.|||.::.|::::|:||. |..:.|.|:
  Fly   637 RVKPQVSFIKKRLDYLVEREYLERD-NYYNIYRYL 670

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cul2	NP_610117.1	Cullin	39..639	CDD:279260	109/565 (19%)
		CULLIN	436..575	CDD:214545	32/140 (23%)
		Cullin_Nedd8	680..745	CDD:214883	23/64 (36%)
Cul6	NP_648620.1	COG5647	25..670	CDD:227934	145/683 (21%)
		CULLIN	362..500	CDD:214545	32/142 (23%)
		Cullin_Nedd8	606..661	CDD:287520	21/56 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45467937
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5647
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1040292at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11932
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.850