DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul2 and Cul1

DIOPT Version :10

Sequence 1:NP_610117.1 Gene:Cul2 / 35420 FlyBaseID:FBgn0032956 Length:753 Species:Drosophila melanogaster
Sequence 2:NP_036172.1 Gene:Cul1 / 26965 MGIID:1349658 Length:776 Species:Mus musculus


Alignment Length:791 Identity:280/791 - (35%)
Similarity:430/791 - (54%) Gaps:84/791 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VWPRLRCIAESVITLTKVERSVWNTSFSDVYTLCVAQPEPMADR--------------------- 56
            :|..||...:.|.|...:.:|.:...::.||..|.:..:....|                     
Mouse    20 IWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQTPGGAQFV 84

  Fly    57 ---LYGETKHFLEQHVQEMLAKKVLIEGECSHSNGGPDL-----LQRYYITWMEYSQGIKYLHQL 113
               ||...|.||:.::..:|             ..|.||     |:.|...|.:|....|.|:.:
Mouse    85 GLELYKRLKEFLKNYLTNLL-------------KDGEDLMDESVLKFYTQQWEDYRFSSKVLNGI 136

  Fly   114 YIYLNQQHIKKQKITDTESFYGNLSSDAAEQMEIGELGLDIWRLYMIEYLSSELVRHILEGIAAD 178
            ..|||:..::::.....:..|           ||..|.|..||..:...|:.::...:|:.|..:
Mouse   137 CAYLNRHWVRRECDEGRKGIY-----------EIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKE 190

  Fly   179 RASNGTLDHHRVQIINGVIHSFVEV---QD--YKKTGSLKLYQELFEGPMLEASGAYYTDEANKL 238
            |  ||...:.|  :|:||:.|:||:   :|  :.|..:|.:|:|.||...|..:..:||.|:.:.
Mouse   191 R--NGETINTR--LISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEF 251

  Fly   239 LHRCSVSEYMQEV-IRILEYESRRAQKFLHVSSLPKLRKECEEKFINDRLGFIYSECREMVSEER 302
            |.:..|:|||::. .|:|| |.||.|.:||.|:..:|.::||:..|...|...::|.:.::..::
Mouse   252 LQQNPVTEYMKKAEARLLE-EQRRVQVYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADK 315

  Fly   303 RQDLRNMYVVLKPIPDNLKSELITTFLDHIKSEGLQTVSALKGE---NIHIAFVENMLKVHHKYQ 364
            .:||..||.::..|.|.| .||......||.::||..:... ||   |....:|:.:|.||.||.
Mouse   316 NEDLGRMYNLVSRIQDGL-GELKKLLETHIHNQGLAAIEKC-GEAALNDPKMYVQTVLDVHKKYN 378

  Fly   365 ELIADVFENDSLFLSALDKACASVINRRPTER---QPCRSAEYVAKYCDTLLKKSKTC--EAEID 424
            .|:...|.||:.|::||||||...||.....:   ...:|.|.:|:|||:|||||...  |||::
Mouse   379 ALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELE 443

  Fly   425 QKLTNNITIFKYIEDKDVYQKFYSRLLAKRLIHEQSQSMDAEEGMINRLKQACGYEFTNKLHRMF 489
            ..|...:.:|||||||||:||||:::|||||:|:.|.|.|||..||::||||||:|:|:||.|||
Mouse   444 DTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMF 508

  Fly   490 TDISVSVDLNNKFNTHLKDSNVDLGINLAIKVLQAGAWPLGSTQVIPFAVPQEFEKSIKMFEDYY 554
            .||.||.|||.:|..||.:|. .|.::.:|:||.:|:||.  .|...||:|.|.|:|.:.|..:|
Mouse   509 QDIGVSKDLNEQFKKHLTNSE-PLDLDFSIQVLSSGSWPF--QQSCTFALPSELERSYQRFTAFY 570

  Fly   555 HKLFSGRKLTWLHHMCHGELKLSHLKKSYIVTMQTYQMAIILLFETCDSLSCREIQNTLQLNDET 619
            ....||||||||:.:..|||..:..|..|.:...|:||||:|.:.|.|:.:.:::.::.|:..:.
Mouse   571 ASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDI 635

  Fly   620 FQKHMQPIIESKLLNASSEN-------LAGETRIELNLDYTNKRTKFKISSALQKETPQEVEHTI 677
            ..:.:|.:::||||....||       |..:|.|:|.|.|.||:.:..|:..::.|..||.|.|.
Mouse   636 LAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTH 700

  Fly   678 NSVDEDRKLFLQAAIVRIMKARKVLKHNALIQEVLSLSKVSFTPNIAMIKKCVESLIDKQYIERT 742
            .:::|||||.:|||||||||.||||||..|:.|||:.....|.|.:.:||||::.||:|:|:||.
Mouse   701 KNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERV 765

  Fly   743 ANSGDEYSYMA 753
            ....|.|||:|
Mouse   766 DGEKDTYSYLA 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul2NP_610117.1 Cullin 14..652 CDD:459983 230/687 (33%)
Cullin_Nedd8 683..745 CDD:463146 35/61 (57%)
Cul1NP_036172.1 Cullin 21..660 CDD:459983 225/672 (33%)
Cullin_Nedd8 706..768 CDD:463146 35/61 (57%)

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