DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cul2 and Cul3

DIOPT Version :10

Sequence 1:NP_610117.1 Gene:Cul2 / 35420 FlyBaseID:FBgn0032956 Length:753 Species:Drosophila melanogaster
Sequence 2:XP_061516687.1 Gene:Cul3 / 1277848 VectorBaseID:AGAMI1_007458 Length:785 Species:Anopheles gambiae


Alignment Length:831 Identity:213/831 - (25%)
Similarity:380/831 - (45%) Gaps:149/831 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLKPKIVEFVDVWPRLRCIAESVITLTKVERSVWNTSFSDV----YTLCVAQPEPMADRLYGET 61
            |::..|.||  .:|..|:   .::..:.|...|  ..||.::    ||:.:   ....:|||...
Mosquito    26 MTMDEKYVE--SIWSLLK---NAIQEIQKKNNS--GLSFEELYRNAYTMVL---HKHGERLYSGL 80

  Fly    62 KHFLEQHVQEMLAKKVLIEGECSHSNGGPDLLQRYYITWMEYSQGIKYLHQLYIYLNQQHIKKQK 126
            |..:..|::..:.::||....|       :.||.....|.::...:..:..:.:|:::.::::  
Mosquito    81 KEVVTHHLESKVREEVLRSFNC-------NFLQTLNQCWNDHQTSMVMIRDILMYMDRVYVQQ-- 136

  Fly   127 ITDTESFYGNLSSDAAEQMEIGELGLDIWRLYMIEY--LSSELVRHILEGIAADRASNGTLDHHR 189
             .|.::.|              .|||:|:|..::.|  :...:...:|..:..:|... .:||..
Mosquito   137 -NDVDNVY--------------NLGLNIFRDQVVRYPRIRDHMRETLLNMVMCERKGE-AIDHIA 185

  Fly   190 VQ------IINGVIHSFVEVQDYKKTGSLKLYQELFEGPMLEASGAYYTDEANKLLHRCSVSEYM 248
            ::      ::.|:...:|             |:|.||.|.|..|.|:|..|:.|.|...|.|.|:
Mosquito   186 IKNACQMLMVLGINQRWV-------------YEEDFERPFLTQSAAFYKLESQKFLAENSASVYI 237

  Fly   249 QEVIRILEYESRRAQKFLHVSSLPKLRKECEEKFINDRL---------GFIYSECREMVSEERRQ 304
            :.|...:..|:.||:.:|..|:..::.:..|::.|...:         |.:|     |:...:.:
Mosquito   238 RRVEARITEEAERAKLYLDESTESRIVEVVEDELIKKHMRTIVEMENSGVVY-----MLQNTKTE 297

  Fly   305 DLRNMYVV-------LKPIPDNLKSELITTFLDHIKSEGLQTVSALKGENIHIAFVENMLKVHHK 362
            ||..|:.:       ||.|.|.:...|.:...|.:|.|.       .|....|.||:|:|.:..:
Mosquito   298 DLACMHKLFSRVSGGLKTIADCVSQNLRSLGRDLVKEEE-------NGSTNPITFVQNLLDLKDR 355

  Fly   363 YQELIADVFENDSLFLSALDKACASVINRRPTERQPCRSAEYVAKYCDTLLKKSKTC----EAEI 423
            ....:...|.||..|.:.:.......:|..      .:|.||::.:.|..|||.  |    |.||
Mosquito   356 SDHFLYHSFNNDKTFKNMISSDFEHFLNLN------SKSPEYLSLFIDDKLKKG--CKGMSEQEI 412

  Fly   424 DQKLTNNITIFKYIEDKDVYQKFYSRLLAKRLIHEQSQSMDAEEGMINRLKQACGYEFTNKLHRM 488
            :..|...:.:|:|:::|||::::|...|||||:..:|.|.|:|:.||::||..||.:||:||..|
Mosquito   413 ETILDKTMVLFRYLQEKDVFERYYKAHLAKRLLLNKSVSDDSEKNMISKLKTECGCQFTSKLEGM 477

  Fly   489 FTDISVSVDLNNKFNTHLKDSNVDL-GINLAIKVLQAGAWPLGSTQVIPFA-VPQEFEKSIKMFE 551
            |.|:|||..:..:|..|:.:.|..| |:.|.:::|..|.||..|  |.|.. :|....|:.:.|:
Mosquito   478 FKDMSVSNTVMEEFKNHINNDNSALEGVELTVRILTTGFWPTQS--VTPNCNIPAAPRKAFETFK 540

  Fly   552 DYYHKLFSGRKLT--------WLHHMCHGELKLSHLK---------------------------- 580
            .:|....|||:||        :::...:| :|....|                            
Mosquito   541 RFYLAKHSGRQLTLQPQLGTVYMNAEFYG-VKAEKEKTEGNCSSTAPSAGSSSAPTGGAASLDAP 604

  Fly   581 KSYIVTMQTYQMAIILLFETCDSLSCREIQNTLQLNDETFQKHMQPII----ESKLL---NASSE 638
            |.:::.:.||||.:::||...:.::..:||....:..:...:.:|.:.    :.:||   ..:|:
Mosquito   605 KRHVLQLSTYQMCVLMLFNNRERMTYEDIQQETDIPSKDLIRALQSLSMGKQQQRLLVRTPKTSK 669

  Fly   639 NLAGETRIELNLDYTNKRTKFKISSALQK-ETPQEVEHTINSVDEDRKLFLQAAIVRIMKARKVL 702
            .:.......:|..:.:|..|.||.:...| |:..|.:.|.:.||||||..::|||||||||||.:
Mosquito   670 EIVSTDEFYVNDAFVSKFHKVKIQTVAAKGESEPERKETRSKVDEDRKHEIEAAIVRIMKARKRM 734

  Fly   703 KHNALIQEVLSLSKVSFTPNIAMIKKCVESLIDKQYIERTANSGDEYSYMA 753
            .||.|:.:|.|..|..|.|:..:|||.:|.||:::|:.||......|.|:|
Mosquito   735 PHNLLVSDVTSQLKSRFLPSPVIIKKRIEGLIEREYLARTPEDRKIYVYLA 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul2NP_610117.1 Cullin 14..652 CDD:459983 164/714 (23%)
Cullin_Nedd8 683..745 CDD:463146 31/61 (51%)
Cul3XP_061516687.1 None

Return to query results.
Submit another query.