DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ac3 and odr-1

DIOPT Version :9

Sequence 1:NP_610116.2 Gene:Ac3 / 35419 FlyBaseID:FBgn0023416 Length:1167 Species:Drosophila melanogaster
Sequence 2:NP_001362115.1 Gene:odr-1 / 181479 WormBaseID:WBGene00003848 Length:1047 Species:Caenorhabditis elegans


Alignment Length:1123 Identity:223/1123 - (19%)
Similarity:395/1123 - (35%) Gaps:349/1123 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 YSHWDSLLSNQLAANAVLIATA--------ALIGLLYYFMGEAKQKRAFLEAKKSLEVKMVIEEQ 259
            :.:|.|  :..:.|:||..|||        ..|...:...|:...|.|      |..:..|....
 Worm    26 FDNWPS--AQNVCASAVADATANGQCTTKSIQINQQHGCSGDNSVKSA------SYAINAVASRT 82

  Fly   260 SAEQERLLLSVLPKHVAIKMREDLGSSSSEAFKKIYMSRHENVSILYADIVGFTAISSTYSAQDL 324
            |.|.:.:.       |......|:.:...  |.:|:.|          .::|:..:......|:|
 Worm    83 SGELDFVF-------VGPTCTTDIRTIGD--FAEIWKS----------PVIGYEPVFEARGVQEL 128

  Fly   325 VKMLNELFARFD---------RLAEKYQQLRIKILGDCYYCISG---APDERPDHAVLCVHMGLS 377
            ..::|  .|:|.         .|.::.:|:.|.::|......:|   :.|.|..:.:      ::
 Worm   129 TSVIN--VAQFSVGGVAETLVFLMKELEQVEITLVGSVKVLPNGLSLSNDLRSYNEI------MN 185

  Fly   378 MVKAIKYVQQKAN----SPVDMRV--GIHTGAVLAGILGQRQWQFDVYSKDVELANKMESSGKAG 436
            ..|..:||:...|    :.||.::  |.....|.|..       :|:||....:..:..|..:..
 Worm   186 SFKIREYVEVDENDVDWTKVDQKIKRGARMIVVCADF-------YDIYSAFYNIGIRSLSGFRFI 243

  Fly   437 RVHISD------------KTLAFLNGEF-------EVEAAFGEKREELLRIAGLKTYFITKVVKA 482
            .|.|.:            |.|.:.:..|       :...||...::.:..:|..:.....::..|
 Worm   244 IVVILNKPPDEILNQPNVKNLLYGSNAFIISPLQEQYSDAFSIMQDVIPNLADDQFTTFLRIYHA 308

  Fly   483 FASPCAKKIN--ETQAEIAHPNPNGS--TTDIVSDEDDND--------------ATLDDEELLAQ 529
            ..:.|...:|  |||.:..|...:|.  ||...:...||.              |.:..|.:|..
 Worm   309 CYAYCVGSVNGAETQTDNYHTAMSGKAVTTKYGTFTFDNSGSVLTNYAVFTINPAEMTFESILTL 373

  Fly   530 NSVS------NGHQIGIAVTAD------------------------------------------- 545
            .||:      |..|:....|:|                                           
 Worm   374 KSVAKSCDTYNCFQLSPNKTSDLLWTLKDMDPPDDCVAKSSCVNYIPHIIAAVVIVTIIVIAIVI 438

  Fly   546 ------------------EEEQVKL---ENFKQRLKDELVTR----DGHENLTKDTNIF------ 579
                              .:|.:|:   :|...:::.||..|    |....||....:|      
 Worm   439 IVKQRRHKLNIYKLTWKVPKESLKIIVNKNADAKMQRELENRASNTDNAAALTSRRRVFGSYALV 503

  Fly   580 --LRFKNPQLEQLYAVYREPYSSLPLLAALLVQCIDVLYSYLVLPRSTL-HFINIAAPLVPIAML 641
              .|.:..|.:|:..: ..|.::|           |.|||...|....| .|..|......:.|.
 Worm   504 GTQRAEYVQFKQIRKI-NFPETTL-----------DYLYSLKQLQHDNLAKFYGIQVNDDIMTMT 556

  Fly   642 VVISLAESFSGMLPKFFVDVSKRFNDITFVRELAAIIIALTIGFSNVIDMFFFVTFVRTEHIVSE 706
            ::.:|.|  .|.|.:|.:|           |:         .|..:.....|....::....:.:
 Worm   557 ILHTLVE--RGTLEEFCLD-----------RD---------FGMDDTFKSAFMRDILKGLQYLHK 599

  Fly   707 SEFNVTASLES-----DINLVVE----GMVTAEHLLPASFVEQMRDA----VPTE---RVLYPSY 755
            |.......|::     |||.|::    |:        ::|:....||    ||.:   .:.||.|
 Worm   600 SSIGYHGHLQASTCLIDINWVLKLTLYGV--------SNFMSDQLDAENIKVPEQAAHMITYPQY 656

  Fly   756 LSNFGVLILIAIAVIAQLTHL----------TKILLLLSIAALHCYFNIFIM----QDLYALEDD 806
                         |.....|:          .:::.......::|...||.|    :|.|.|...
 Worm   657 -------------VCFPPEHIREYDDSGKQPPRVVRGSPKGDIYCVGMIFYMMVEREDPYHLIHS 708

  Fly   807 FE--------------HQPIISTRYAASGLLL----------------VAAL--ALSTL-----A 834
            .|              |.|.|:..|....:||                :..|  ::||:     .
 Worm   709 VERPNATLIKQILNENHMPRITDDYRQENMLLEMCKECWDRNPDKRPTIKKLIESISTVYPLSKG 773

  Fly   835 RHMDHEDRVIFKWKTEVAEQK--ETAN--DMRQRNEALVYNVLPVHVAEHFMKNTKRSHDDLYSQ 895
            ..:|...|:..|:..|:.:..  .||:  |.:.:...|:..:||..:|:. :||..    .:..:
 Worm   774 NLVDQMIRMSEKYADELEQMVAIRTADLADAQMQTMRLLNEMLPASIAKD-LKNGL----IMPPR 833

  Fly   896 SYAEVGVLFASMPNFSDFYSEETVNNQGLECLRFLNEVISDFDALLELPQFQDIIKIKTIGSTYM 960
            ||....|:|..:.:|:......:..    :.:.|||::...||.:::.   .|..|::|.|.|||
 Worm   834 SYESATVMFVQICDFNALMKRSSPE----QVIAFLNDIYDQFDTVIKR---HDAYKVETTGETYM 891

  Fly   961 AASGINVQRTVRNDAPITERWSHLAILVEFALELK-----HALQSINEQSFNHFVLKMGINHGPI 1020
            .|||:          |......|:..:.|.:||::     :.||  :::::. ..:::|.:.|||
 Worm   892 VASGV----------PHENEGRHIFEVAEISLEIREISYIYVLQ--HDKNYK-LRIRIGFHAGPI 943

  Fly  1021 TAGVIGARKPHYDIWGNTVNVASRMESTGKAGAIQVTEETCNILRLFG---YTFLQRGLVAVKGK 1082
            .|||||.|.|.|.::|:|||.||||:|......||.:|.|..:  ||.   |.|::||:|.||||
 Worm   944 AAGVIGIRSPRYCLFGDTVNFASRMQSNCPPNQIQTSEITARL--LFDSHEYKFVKRGIVHVKGK 1006

  Fly  1083 GQLMTFYLQGKSQSSAEP 1100
            |::..::|........||
 Worm  1007 GEVNCYWLNEHLHEETEP 1024

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ac3NP_610116.2 AC_N <127..285 CDD:292831 18/89 (20%)
CYCc 256..453 CDD:214485 38/233 (16%)
Guanylate_cyc 294..476 CDD:278633 36/218 (17%)
CYCc 860..1071 CDD:214485 62/218 (28%)
Guanylate_cyc 892..1092 CDD:278633 65/207 (31%)
odr-1NP_001362115.1 Periplasmic_Binding_Protein_type1 63..378 CDD:385651 63/354 (18%)
PK_GC 495..768 CDD:270894 58/327 (18%)
CYCc 803..996 CDD:214485 62/219 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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