DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2201 and ckb-4

DIOPT Version :10

Sequence 1:NP_724349.1 Gene:CG2201 / 35417 FlyBaseID:FBgn0032955 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_503573.1 Gene:ckb-4 / 184864 WormBaseID:WBGene00000514 Length:381 Species:Caenorhabditis elegans


Alignment Length:515 Identity:112/515 - (21%)
Similarity:184/515 - (35%) Gaps:203/515 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 SNATLEEIRHAAARICRDYLTGPWKVVTPESLVVKRISGGLSNFLYYVSLPDLNDYDELDEQKQQ 106
            |:..||::    ..:..|||.|.|.:|....:.|.:|:||.||.||.                  
 Worm    16 SDVILEKV----IELGSDYLRGGWALVEKSEVTVTQITGGQSNILYL------------------ 58

  Fly   107 QEDIIGATATVTNRSGVFIHDDESAAKAVGVTLMARELINNDDVADAAPGATQAHKRQRCDSNSR 171
                                                              ||.|..:...|:   
 Worm    59 --------------------------------------------------ATSASTKLSPDT--- 70

  Fly   172 ECSSSKRLHAPKQQPREVLLRIYGQTHGDHALESMITESVVFALLSERNYGPKLHGIFPGGRIEQ 236
                          |...|:||:.|     |...:.||:|||::||||..||||:|.|||||:|:
 Worm    71 --------------PSCFLIRIHRQ-----APSQVFTETVVFSVLSERGLGPKLYGFFPGGRLEE 116

  Fly   237 YIPARALTTAELGEQRILKRVAEKMGEIHSLNIPMSKEPDWIWNCMQRWVSGLESIVNGSVQTNQ 301
            ::|:|.|....:....|.::|.....:.|.:.:|:||....: ..::..:.|.::: .|.|....
 Worm   117 FLPSRTLDVDSIKLPEIARQVGSLYPKYHDIEVPISKSAGAL-KFIKENLEGYKAL-GGKVLKMC 179

  Fly   302 KSSVLKKQMELMRTFDYV-QEMA----WIRSIIDEGDYPVVFCHNDLQEGNILMRQPSAGQNERT 361
            ..||....|....|.:.: ||:|    |.: :.||   .:||.||||...|:|            
 Worm   180 PHSVKYDSMPSELTVEQIEQEIATFERWCK-VFDE---TIVFSHNDLAPLNVL------------ 228

  Fly   362 PRESISSLRSNFDETLGDSLDGNSNISDTETHKSRSVSPSPCPELDTTNDSALDSSFMADNEPDL 426
                                    .::||:                                 ::
 Worm   229 ------------------------ELNDTK---------------------------------EI 236

  Fly   427 IIIDFEYCAYNYRGYDLANHFIEWTFDYTNPQFPYFYHNSSNCATVQQRRDFIVNY--------- 482
            :.|||||.:||:||:||.....|..|||.:|..|..        .:.|  |::.|:         
 Worm   237 VFIDFEYSSYNWRGFDLCMFLCENAFDYRDPTPPGL--------VIDQ--DYMENHPNLQIFCEA 291

  Fly   483 -------LKKFHDDENYNITGQELMKVDA---EIQFFTMLSHLFWSLWSVINVTSAIEFG 532
                   :|..:..:.:.:|.....:|::   |.:||..|.::||::||:....:..|.|
 Worm   292 YIDTQYKMKTANPKQKFPLTEGRAAEVESLMLECKFFIPLVNMFWAVWSLRQHLAKYEIG 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2201NP_724349.1 ChoK_euk 159..549 CDD:270705 93/398 (23%)
ckb-4NP_503573.1 ChoK_euk 43..370 CDD:270705 103/484 (21%)

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