DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2201 and ckb-3

DIOPT Version :9

Sequence 1:NP_001033932.2 Gene:CG2201 / 35417 FlyBaseID:FBgn0032955 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_497881.2 Gene:ckb-3 / 181905 WormBaseID:WBGene00000513 Length:368 Species:Caenorhabditis elegans


Alignment Length:482 Identity:103/482 - (21%)
Similarity:165/482 - (34%) Gaps:208/482 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 DYLTGPWKVVTPESLVVKRISGGLSNFLYYVSLPDLNDYDELDEQKQQQEDIIGATATVTNRSGV 123
            |:|...||.|....:.|.||.||.||.:::|:                                 
 Worm    28 DFLGDEWKNVNRSEVTVTRILGGQSNHMFHVT--------------------------------- 59

  Fly   124 FIHDDESAAKAVGVTLMARELINNDDVADAAPGATQAHKRQRCDSNSRECSSSKRLHAPKQQPRE 188
                  |:..|....|                                      |:|      ||
 Worm    60 ------SSTSATSFVL--------------------------------------RIH------RE 74

  Fly   189 VLLRIYGQTHGDHALESMITESVVFALLSERNYGPKLHGIFPGGRIEQYIPARALTTAELGEQRI 253
                  ||:..|       |:.|.||:.|||..||||:|.|..||:|:::|:..|...::....|
 Worm    75 ------GQSQFD-------TDIVNFAIFSERGLGPKLYGFFEEGRMEEFLPSVTLKLNDVLNTEI 126

  Fly   254 LKRVAEKMGEIHSLNIPMSKEPDWIWNCMQ---------RWVSGLESIVNGSVQT---NQKSSVL 306
            .:::.....:.|::|:|:||..    .|.|         :.:.|.:..:..:|.|   :.||..:
 Worm   127 SRKIGAAFPKYHAINVPVSKSR----RCFQIMRESLHDYQALGGGDFAIFPTVVTYSEHPKSISI 187

  Fly   307 KKQMELMRTFDYVQEMAWIRSIIDEGDYPVVFCHNDLQEGNILMRQPSAGQNERTPRESISSLRS 371
            |   :|:...|.:::.:     ||..:..:|||||||...|||                      
 Worm   188 K---DLLTEIDLLEKWS-----IDLFENTLVFCHNDLTSSNIL---------------------- 222

  Fly   372 NFDETLGDSLDGNSNISDTETHKSRSVSPSPCPELDTTNDSALDSSFMADNEPDLIIIDFEYCAY 436
                                             :|::|.              :|:.||:|..:|
 Worm   223 ---------------------------------QLNSTG--------------ELVFIDWENASY 240

  Fly   437 NYRGYDLANHFIEWTFDYTNPQFPYFYHN---SSNCATVQQRRDFIVNYLKKFHDDEN------- 491
            |:||||||.|..|... ..|...|....|   :.|...:|.       :.:.:.|.||       
 Worm   241 NWRGYDLAMHLSEAAV-IRNTCPPGIVINEELTDNPPNLQA-------FCEAYVDSENKIKGLLS 297

  Fly   492 YNITGQELMKVDAEIQFFTMLSHLFWS 518
            .||:.| :..:..|.:||..::||||:
 Worm   298 SNISSQ-VNSLIQECKFFWPITHLFWA 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2201NP_001033932.2 ChoK_euk 159..549 CDD:270705 87/382 (23%)
ckb-3NP_497881.2 PKc_like 42..356 CDD:304357 98/468 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167400
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1469912at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22603
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.810

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