DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nompB and STI1

DIOPT Version :9

Sequence 1:NP_724347.3 Gene:nompB / 35414 FlyBaseID:FBgn0016919 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_014670.1 Gene:STI1 / 854192 SGDID:S000005553 Length:589 Species:Saccharomyces cerevisiae


Alignment Length:688 Identity:122/688 - (17%)
Similarity:228/688 - (33%) Gaps:216/688 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 GNIYYSMGIYQKAVKMYRMALD--SVPKSLSQLRLKIRENIGILFIRMGSYSDAAS-SFEFIMTE 280
            ||..::...|.||::::..|::  ..|..:      :..|....:..:..:|||.: :.|.:...
Yeast    12 GNAAFTAKDYDKAIELFTKAIEVSETPNHV------LYSNRSACYTSLKKFSDALNDANECVKIN 70

  Fly   281 RANIRSSIHLLLCYFALGDVEKVKLAFRRL--CDVQTEAIESDMESETNIIKLQQ--QAEP---- 337
            .:..:....|...:..|||:::.:..:::.  .|...:|.:..::   .:.:.||  ||:|    
Yeast    71 PSWSKGYNRLGAAHLGLGDLDEAESNYKKALELDASNKAAKEGLD---QVHRTQQARQAQPDLGL 132

  Fly   338 IQQIGETDGYQSLNNEPVTGSVIKAEGGGKLNETVKFAATVKHRYVVQAL--------------- 387
            .|...:.:..::|...|.|..::|        :....|..:.::...||:               
Yeast   133 TQLFADPNLIENLKKNPKTSEMMK--------DPQLVAKLIGYKQNPQAIGQDLFTDPRLMTIMA 189

  Fly   388 -------------------KKDELAVYRNERRNA---------------------VKRSITMIVD 412
                               |:.|.:....::::|                     .|.|..|.||
Yeast   190 TLMGVDLNMDDINQSNSMPKEPETSKSTEQKKDAEPQSDSTTSKENSSKAPQKEESKESEPMEVD 254

  Fly   413 LISPFIEDNY-----NDGY--NWCIEIIKTSNLAWLANELELNKALVYL--------RQNDVHQA 462
            .....||.:.     |..|  ....|.|:..|.||     ||:|.:.||        .:.:...|
Yeast   255 EDDSKIEADKEKAEGNKFYKARQFDEAIEHYNKAW-----ELHKDITYLNNRAAAEYEKGEYETA 314

  Fly   463 IETLQMYDRKSEGSMTASALTNLSFIYIKMASHCVNQLHEIGSLKNNAPGLINAGIVELGSHNLI 527
            |.||.  |...:|....:....:|..:.::.    |..|::|.||...                 
Yeast   315 ISTLN--DAVEQGREMRADYKVISKSFARIG----NAYHKLGDLKKTI----------------- 356

  Fly   528 LASERFEGALQLQPMNFEARYNLGLVALAQNDYELAEERFELLKEQLMLPSSVQHSHVFYQLAKL 592
               |.::.:|.      |.|....|..|...:.||.:...|                .:....|.
Yeast   357 ---EYYQKSLT------EHRTADILTKLRNAEKELKKAEAE----------------AYVNPEKA 396

  Fly   593 QERRLESGLISNFTPG---AALQAYLQVVGISASDIDSRLFEKVGSLYEQIQDHQEANQYYNEAY 654
            :|.|||..  ..||..   .|::||.:::..:..|                     |..|.|.|.
Yeast   397 EEARLEGK--EYFTKSDWPNAVKAYTEMIKRAPED---------------------ARGYSNRAA 438

  Fly   655 RINMSDIGIASSIGSYYIKLQATERALFYYERAVLADPNDPNLMLRIASCFRNSYLPTKQYLGLF 719
            .:               .||.:...|:....:|:..|||.....:|.|:    :.:..|:|....
Yeast   439 AL---------------AKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT----AQIAVKEYASAL 484

  Fly   720 QKIH-ARFPDNLTCIRALMQVTKSLELGDLYERYASEYTRLQSQQQERQSEQRYQQ-QRFPSAAK 782
            :.:. ||..|     ..:...:.:.|:..||  |.:...|.|........|:.||: .:.|..|.
Yeast   485 ETLDAARTKD-----AEVNNGSSAREIDQLY--YKASQQRFQPGTSNETPEETYQRAMKDPEVAA 542

  Fly   783 FSNR--LRSIRQ-------SNEEHLK--EVGENFNSVV 809
            ....  ::||.|       :.:||:|  ||.:...:::
Yeast   543 IMQDPVMQSILQQAQQNPAALQEHMKNPEVFKKIQTLI 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompBNP_724347.3 TPR_11 213..275 CDD:290150 11/58 (19%)
TPR repeat 213..240 CDD:276809 6/20 (30%)
TPR 216..244 CDD:197478 6/26 (23%)
TPR repeat 245..279 CDD:276809 5/34 (15%)
TPR repeat 284..309 CDD:276809 4/24 (17%)
TPR repeat 479..502 CDD:276809 2/22 (9%)
TPR repeat 509..539 CDD:276809 2/29 (7%)
TPR_16 <529..568 CDD:290168 8/38 (21%)
TPR repeat 544..568 CDD:276809 6/23 (26%)
TPR_11 626..692 CDD:290150 8/65 (12%)
TPR repeat 627..655 CDD:276809 4/27 (15%)
TPR repeat 660..690 CDD:276809 4/29 (14%)
STI1NP_014670.1 PLN03088 5..>106 CDD:215568 17/99 (17%)
TPR repeat 5..33 CDD:276809 6/20 (30%)
TPR repeat 39..69 CDD:276809 5/35 (14%)
TPR repeat 74..102 CDD:276809 4/27 (15%)
STI1 138..193 CDD:407696 7/62 (11%)
3a0801s09 203..>573 CDD:273380 90/471 (19%)
TPR repeat 262..290 CDD:276809 7/32 (22%)
TPR repeat 294..324 CDD:276809 7/31 (23%)
TPR repeat 336..363 CDD:276809 7/50 (14%)
PLN03088 396..>549 CDD:215568 39/201 (19%)
TPR repeat 396..424 CDD:276809 9/29 (31%)
TPR repeat 429..459 CDD:276809 9/65 (14%)
TPR repeat 464..490 CDD:276809 4/29 (14%)
STI1 527..581 CDD:407696 13/54 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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