DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nompB and osm-5

DIOPT Version :9

Sequence 1:NP_724347.3 Gene:nompB / 35414 FlyBaseID:FBgn0016919 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_508511.1 Gene:osm-5 / 180585 WormBaseID:WBGene00003885 Length:820 Species:Caenorhabditis elegans


Alignment Length:888 Identity:254/888 - (28%)
Similarity:412/888 - (46%) Gaps:176/888 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GRPRPPTSQLFSR----------GNLASSRATGGDKSGL------ARPSTAVRAVGYAANCESAH 80
            || ||..||:..|          |.:..:::..|.::.:      |||.||||..||.:      
 Worm    45 GR-RPTASQMGFRDASSSYGKPPGTMMGNQSRMGGRTAMANNNEPARPMTAVRGAGYTS------ 102

  Fly    81 QRFEQFFLEK--AKQQTLSSRAAVDAIKDVNPQMKYKNLEEKIVKLLESSIVLAWQGSPNKLLNL 143
                  |..|  |.::.||:..:.:     |.:.|.:.:|.|::::|..|::    .|..|    
 Worm   103 ------FANKVQAAERPLSTENSGE-----NGEEKCRQMENKVMEMLRESML----ASEKK---- 148

  Fly   144 DTKLAEALSKAKEAFSLDRTLHQFRDQHGENVYHNFDLTYA-------QYERSEMHIEALNTYSI 201
              |..|||.|||||...:|.:.:.|:|.|.....|.|||:.       |||.::|..||||||.|
 Worm   149 --KFKEALDKAKEAGRRERAVVKHREQQGLVEMMNLDLTFTVLFNLAQQYEANDMTNEALNTYEI 211

  Fly   202 MAKNKMFPHVNQLKLNMGNIYYSMGIYQKAVKMYRMALDSVPKSLSQLRLKIRENIGILFIRMGS 266
            :.:|||||:..:||:|:|||::....:.||:|.||||||.||......|:||..|||:.|:||||
 Worm   212 IVRNKMFPNSGRLKVNIGNIHFRKREFTKALKYYRMALDQVPSIQKDTRIKILNNIGVTFVRMGS 276

  Fly   267 YSDAASSFEFIMTERANIRSSIHLLLCYFALGDVEKVKLAFRRLCDVQTEAIESDMESETNIIKL 331
            |.||.|:|:..:.|..|..::::|:|..|.:.|.||::.||.::.|                   
 Worm   277 YDDAISTFDHCVEENPNFITALNLILVAFCIQDAEKMREAFVKMID------------------- 322

  Fly   332 QQQAEPIQQIGETDGYQSLNNEPVTGSVIKAEGGGKLNETVKFAATVKHRYVVQALKKDELAVYR 396
                  |....:.|..:..:::.|.           ||:|               |..|.|..:.
 Worm   323 ------IPGFPDDDYMKEKDDDDVL-----------LNQT---------------LNSDMLKNWE 355

  Fly   397 NERRNAVKRSITMIVDLISPFIEDNYNDGYNWCIEIIKTSNLAWLANELELNKALVYLRQNDVHQ 461
            ...::..:::|...|.:|||.|..:|..||.||:|.:|.|..|.||.|||:.||...::..|:..
 Worm   356 KRNKSDAEKAIITAVKIISPVIAPDYAIGYEWCLESLKQSVHAPLAIELEMTKAGELMKNGDIEG 420

  Fly   462 AIETLQMYDRKSEGSMTASALTN----LSFIY----IKMASHCVNQLHEIGSLKNNAPGLINAGI 518
            |||.|::::  |:.|.||||..|    |.|:.    :..|....:|...|.  :.||...:|.|.
 Worm   421 AIEVLKVFN--SQDSKTASAAANNLCMLRFLQGGRRLVDAQQYADQALSID--RYNAHAQVNQGN 481

  Fly   519 VELGSHNLILASERFEGALQLQPMNFEARYNLGLVALAQNDYELAEERFELLKEQLMLPSSVQHS 583
            :...:.:|..|...:..||.......:|.:|:||.|.||.:.|.|.|.|..|...|:  ::||  
 Worm   482 IAYMNGDLDKALNNYREALNNDASCVQALFNIGLTAKAQGNLEQALEFFYKLHGILL--NNVQ-- 542

  Fly   584 HVFYQLAKLQERRLESGLISNFTPGAALQAYLQVVGISASDIDSRLFEKVGSLYEQIQDHQEANQ 648
             |..|||.:.|...:|        ..|::.|.|...:..:  |..:..|:..||:|..|..:|.|
 Worm   543 -VLVQLASIYESLEDS--------AQAIELYSQANSLVPN--DPAILSKLADLYDQEGDKSQAFQ 596

  Fly   649 YYNEAYRINMSDIGIASSIGSYYIKLQATERALFYYERAVLADPNDPNLMLRIASCFRNSYLPTK 713
            .:.::||...|::.....:.|||::.|.:|:::.|.|:|.|..||.....:.||||.|.    |.
 Worm   597 CHYDSYRYFPSNLETVEWLASYYLETQFSEKSINYLEKAALMQPNVSKWQMMIASCLRR----TG 657

  Fly   714 QY---LGLFQKIHARFPDNLTCIRALMQVTKSLELGDL----YERYASEYTRLQSQQQERQSEQR 771
            .|   ..|:::||.:||.:|.|::.|:::.     |||    |:.|..:.     ::.|:.::.|
 Worm   658 NYQRAFELYRQIHRKFPQDLDCLKFLVRIA-----GDLGMTEYKEYKDKL-----EKAEKINQLR 712

  Fly   772 YQQQRFPSAAK--FSNRLRSIRQSNEEHL------------KEVGENFNSVVHTQSPYT------ 816
            .|::...|..|  .:|...|:..|....|            ::...:...::.:.:|:|      
 Worm   713 LQRESDSSQGKRHSANSTHSLPPSGLTGLGSGSGGSSGGGTRQYSAHVPLLLDSGTPFTVAQRDM 777

  Fly   817 --SILQFDPLGPPAERPKTG-RPLQSRDDVDDDAEMNPESLLP 856
              ....:|.....:.||||| |...:..::||..:.: :||||
 Worm   778 KAEDFSYDDPVAISSRPKTGTRKTTTDTNIDDFGDFD-DSLLP 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompBNP_724347.3 TPR_11 213..275 CDD:290150 32/61 (52%)
TPR repeat 213..240 CDD:276809 13/26 (50%)
TPR 216..244 CDD:197478 14/27 (52%)
TPR repeat 245..279 CDD:276809 16/33 (48%)
TPR repeat 284..309 CDD:276809 8/24 (33%)
TPR repeat 479..502 CDD:276809 8/30 (27%)
TPR repeat 509..539 CDD:276809 8/29 (28%)
TPR_16 <529..568 CDD:290168 13/38 (34%)
TPR repeat 544..568 CDD:276809 10/23 (43%)
TPR_11 626..692 CDD:290150 20/65 (31%)
TPR repeat 627..655 CDD:276809 7/27 (26%)
TPR repeat 660..690 CDD:276809 8/29 (28%)
osm-5NP_508511.1 TPR repeat 137..181 CDD:276809 17/53 (32%)
TPR repeat 188..216 CDD:276809 11/27 (41%)
TPR_12 219..289 CDD:290160 34/69 (49%)
TPR repeat 221..251 CDD:276809 14/29 (48%)
TPR repeat 261..289 CDD:276809 15/27 (56%)
TPR repeat 439..467 CDD:276809 5/27 (19%)
TPR_11 472..532 CDD:290150 19/59 (32%)
TPR repeat 473..501 CDD:276809 6/27 (22%)
TPR repeat 506..536 CDD:276809 12/29 (41%)
TPR_19 519..584 CDD:291240 21/79 (27%)
DUF2989 <524..595 CDD:288105 23/85 (27%)
TPR repeat 541..567 CDD:276809 10/36 (28%)
TPR repeat 609..635 CDD:276809 7/25 (28%)
TPR_16 615..676 CDD:290168 23/64 (36%)
TPR repeat 643..668 CDD:276809 8/28 (29%)
TPR repeat 677..705 CDD:276809 8/37 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 77 1.000 Domainoid score I5748
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4761
Inparanoid 1 1.050 280 1.000 Inparanoid score I1758
Isobase 1 0.950 - 0 Normalized mean entropy S3680
OMA 1 1.010 - - QHG56319
OrthoDB 1 1.010 - - D137383at33208
OrthoFinder 1 1.000 - - FOG0007391
OrthoInspector 1 1.000 - - oto20071
orthoMCL 1 0.900 - - OOG6_103642
Panther 1 1.100 - - LDO PTHR44117
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6827
SonicParanoid 1 1.000 - - X5514
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.960

Return to query results.
Submit another query.