Protein Alignment Lamp1 and lamp1b

DIOPT Version :9

• Sequence 1: NP_610111.3
• Gene: Lamp1 / 35411
• FlyBaseID: FBgn0032949
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: NP_001313461.1
• Gene: lamp1b / 563328
• ZFINID: ZDB-GENE-030131-9303
• Length: 253
• Species: Danio rerio
• Alignment Length: 266
• Identity: 69/266 - (25%)
• Similarity: 113/266 - (42%)
• Gaps: 62/266 - (23%)

  Fly    72 TSTITPRSTTPSTESPSTTAPVISTTIAPQPYPQPSIGAWN------TSCIMLQMAAQLNFTY-E 129
            ||.:...:.||.|.||.      ::.:.|.|   |..|.:|      |.|::.:||.|||.:: .
Zfish    29 TSNVPTTAATPETSSPP------ASPVTPGP---PERGNYNVTNANDTVCLLARMALQLNISFTS 84

  Fly   130 AREGNFTTGLYNIPSNASVEDAECKSQTTQFIHLIWGPETSKQSLIMYFNKSNDTTVLSFM---- 190
            ..:|.....:.|:..|.......|              |:.:.|||:  .:.|.|...||.
Zfish    85 TSQGKLVQEVLNLHPNLVKFSGSC--------------ESDRASLIL--TEDNITLTFSFSLNST 133

  Fly   191 --QIHLA--LLPEDFPD-AK----ENQTVQLITRSDGAFKTPENMSYHCTRVQKINMTETLDAEQ 246
              :.||:  .|....|| ||    .|.|:..:..:.|       .||.|.:.:.:::|:...
Zfish   134 SNKYHLSGLELSASLPDMAKGLVVRNTTLNYLVGTLG-------HSYMCQKEKTLSVTQNFS--- 188

  Fly   247 LIGWISVSHVQVEAFRRANDTGFSVGHDCDSSETSDVVPIAVGIALAALILVVLISYLCARRRST 311
                ::...:||:.|....|  |....:|:..|...::||.||.|||.|:|:|:::||..|.||.
Zfish   189 ----LNTFQLQVQPFGVKGD--FGAAEECELDEDDMLIPIVVGAALAVLVLIVILAYLIGRNRSH 247

  Fly   312 SRGYMS 317
            : ||.:
Zfish   248 A-GYQT 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lamp1	NP_610111.3	Lamp	<77..318	CDD:279622	67/261 (26%)
lamp1b	NP_001313461.1	Lamp	<25..253	CDD:279622	69/266 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	49	1.000	Domainoid score	I11811
eggNOG	1	0.900	-	-		E1_KOG4818
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	87	1.000	Inparanoid score	I5125
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0002671
OrthoInspector	1	1.000	-	-		otm25305
orthoMCL	1	0.900	-	-		OOG6_104018
Panther	1	1.100	-	-	O	PTHR11506
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R4256
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	11	10.850