Sequence 1: | NP_610111.3 | Gene: | Lamp1 / 35411 | FlyBaseID: | FBgn0032949 | Length: | 318 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001012015.1 | Gene: | Lamp3 / 303801 | RGDID: | 1307928 | Length: | 408 | Species: | Rattus norvegicus |
Alignment Length: | 325 | Identity: | 76/325 - (23%) |
---|---|---|---|
Similarity: | 132/325 - (40%) | Gaps: | 74/325 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 37 NVSDLFLEQANPLTSSSSTIST--SSTTTEKPI-TTRST----STITPRST-------------T 81
Fly 82 PSTESPSTTAPVIST-------------TIAPQP-YPQPSIGAWNTS--------------CIML 118
Fly 119 QMAAQLNFTYEAREGNFTTGLYNIPSNASVEDAECKSQTTQ-FIHLIWGPETSKQSLIMYFNKSN 182
Fly 183 DTTVLSFMQIHLALLPEDFPDAKENQTVQLITRSDGAFKTPENMSYHCTRVQKINMTETLDAEQL 247
Fly 248 IGWISVSHVQVEAFRRANDTGFSVGHDCDSSETSDVVPIAVGIALAALILVVLISYLCARRRSTS 312
Fly 313 312 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lamp1 | NP_610111.3 | Lamp | <77..318 | CDD:279622 | 61/278 (22%) |
Lamp3 | NP_001012015.1 | Lamp | 216..358 | CDD:396046 | 27/163 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 41 | 1.000 | Domainoid score | I12171 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4818 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11506 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
5 | 4.870 |