Protein Alignment Lamp1 and lmp-2

DIOPT Version :9

• Sequence 1: NP_610111.3
• Gene: Lamp1 / 35411
• FlyBaseID: FBgn0032949
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: NP_001379622.1
• Gene: lmp-2 / 180467
• WormBaseID: WBGene00015471
• Length: 296
• Species: Caenorhabditis elegans
• Alignment Length: 249
• Identity: 60/249 - (24%)
• Similarity: 92/249 - (36%)
• Gaps: 57/249 - (22%)

  Fly    93 VISTTIAPQPYPQPSIGAWNTSCIMLQMAAQLNFTYEAREGNFTTGLYNIPSNASVED--AECKS 155
            |.|||..|              ||:.|....|..||...:..... :.::|::::.:.  :.|..
 Worm    35 VNSTTKEP--------------CIIFQADIYLYLTYHTSDSEKDV-IVHVPTSSTADTGVSSCNV 84

  Fly   156 QTTQFIHLIWGPETSKQSLIMYFNKSNDTTV-----------------LSFMQIHL----ALLPE 199
            ..|..     |.....|.|.:..:..|..|:                 .:..|:::    |..|.
 Worm    85 TITTS-----GMSVESQLLRVNLDHMNGWTIDFAFTKDNRFKTEKEKQFALYQVNITANFASDPT 144

  Fly   200 DFPDAKENQTVQLITRSD--------GAFKTPENMSYHCTRVQK--INMTETLDAEQLIGWISVS 254
            .|||.| ..|.|.....|        |:.......||:|...||  ||..:. |....:.:|...
 Worm   145 AFPDFK-YPTQQYYLHVDPNDLSDIGGSIFASVGHSYYCPSEQKYAINDNDN-DKYGPMAYIKFK 207

  Fly   255 HVQVEAFRRANDTGFSVGHDCDSSE-TSDVVPIAVGIALAALILVVLISYLCAR 307
            ...::||....|: |.....|.:.: |.|:|||.||.|||.||::.|:.||..|
 Worm   208 LTTIQAFMEDTDS-FGPKETCPTDQSTLDLVPIIVGSALAGLIVLTLVVYLIYR 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lamp1	NP_610111.3	Lamp	<77..318	CDD:279622	60/249 (24%)
lmp-2	NP_001379622.1	Lamp	29..214	CDD:396046	39/200 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4818
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG29210
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0002671
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_104018
Panther	1	1.100	-	-	O	PTHR11506
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R4256
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	7	6.850