Protein Alignment Lamp1 and lamp1

DIOPT Version :9

• Sequence 1: NP_610111.3
• Gene: Lamp1 / 35411
• FlyBaseID: FBgn0032949
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: XP_012812038.1
• Gene: lamp1 / 100216290
• XenbaseID: XB-GENE-982706
• Length: 429
• Species: Xenopus tropicalis
• Alignment Length: 312
• Identity: 79/312 - (25%)
• Similarity: 129/312 - (41%)
• Gaps: 57/312 - (18%)

  Fly    20 SSTVF---SQKLIGLPRVGKNVSDL----FLEQANPLTSSSSTISTSSTTTEKPITTRSTSTITP 77
            :.||:   :..||.:..|.....|:    :|:|.| .:...||.|...|.|..|         ||
 Frog   160 NGTVYKCINPHLIRMDNVSATFHDIQLEAYLKQGN-FSQKVSTCSEDVTPTSAP---------TP 214

  Fly    78 RSTTPSTESPSTTAPVISTTIAPQPYPQPSIGAWNTSCIMLQMAAQLNFTYEAREGNFTTGLYNI 142
            ..|.....:|.:..||:...:.....|          |::.::..|:|.||..::|...|.::||
 Frog   215 APTPTHAPAPPSDPPVVQYVVNGSSGP----------CLLAKVGLQMNVTYITKDGKNGTYVFNI 269

  Fly   143 PSNASVEDAECKSQTTQF------IHLIWGPETSKQSLIMYFNKSNDTTVLSFMQIHLALLPEDF 201
            .|.....|..|.:.|...      :||.:.         ...|.|.|...|..:.::     .|.
 Frog   270 DSKGVAVDGNCTNTTASLFLSSGSVHLTFN---------FTLNNSLDVFYLDGVSLN-----TDL 320

  Fly   202 P-DAKENQTVQLITRSDGAFKTPENMSYHCTRVQKINMTETLDAEQLIGWISVSHVQVEAFRRAN 265
            | ||.:.::......|....:|..:.|:.|...|.:.:|....       ::..::||:|| ..:
 Frog   321 PADANDTRSFHAENSSLNYMQTNAHKSFKCNSKQPLQITSNFT-------VNTYNLQVQAF-NID 377

  Fly   266 DTGFSVGHDCDSSETSDVVPIAVGIALAALILVVLISYLCARRRSTSRGYMS 317
            .|.|:...:|...|...:|||.||.|||.|:|:|||:||..|:||.: ||.:
 Frog   378 GTKFATPVECSLDENGMLVPIVVGAALAGLVLIVLIAYLIGRKRSHA-GYQT 428

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lamp1	NP_610111.3	Lamp	<77..318	CDD:279622	63/248 (25%)
lamp1	XP_012812038.1	Lamp	228..377	CDD:366566	36/180 (20%)
		TM_EGFR-like	394..423	CDD:213052	17/28 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	46	1.000	Domainoid score	I11963
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	86	1.000	Inparanoid score	I4998
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0002671
OrthoInspector	1	1.000	-	-		oto105446
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	4.050