Sequence 1: | NP_610111.3 | Gene: | Lamp1 / 35411 | FlyBaseID: | FBgn0032949 | Length: | 318 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001090781.1 | Gene: | lamp5 / 100037871 | XenbaseID: | XB-GENE-941198 | Length: | 276 | Species: | Xenopus tropicalis |
Alignment Length: | 227 | Identity: | 44/227 - (19%) |
---|---|---|---|
Similarity: | 90/227 - (39%) | Gaps: | 63/227 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 113 TSCIMLQMAAQLNFTYEAREGN-----FTTGLYNIPSNASVEDAECKSQTTQFIHLIW------- 165
Fly 166 -------GPETS-----KQSLIMYFNKSNDTTVL---------SFMQIHLALLPEDFPDAKENQT 209
Fly 210 VQLITRSDGAFKTPENMSYHCTRVQKINMTETLDAEQLIGWISVSHVQVEAFRRANDTGFSVGHD 274
Fly 275 CDS---SETSDVVPIAVGIALAALILVVLISY 303 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lamp1 | NP_610111.3 | Lamp | <77..318 | CDD:279622 | 44/227 (19%) |
lamp5 | NP_001090781.1 | Lamp | 41..210 | CDD:366566 | 35/183 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11506 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |