DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17571 and CG5255

DIOPT Version :10

Sequence 1:NP_610109.1 Gene:CG17571 / 35409 FlyBaseID:FBgn0259998 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster


Alignment Length:269 Identity:88/269 - (32%)
Similarity:133/269 - (49%) Gaps:27/269 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLLSVVALVALAASCHGNPGLDFPFGRIVNGEDVDIENYPYQVSVQ-TTKGSHFCGGSLIDSETV 67
            :||.:|...:.|||....|. .:...|||.||:......|||:|:| ...|:|.|||::||...:
  Fly     4 ILLPLVLFTSSAASQILYPP-QYTKNRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWI 67

  Fly    68 LTAAHCMQSYAASELQVRVGSTSRSSGGEVVTVRAFKY--------HEGYNSKLMINDVAIIKLS 124
            :|||||.:...|:..:|..|:......|.       ||        |..|..:...||:|::.|:
  Fly    68 ITAAHCTRGRQATAFRVLTGTQDLHQNGS-------KYYYPDRIVEHSNYAPRKYRNDIALLHLN 125

  Fly   125 SPVRQTSKIRAIELADSEAVSGTNAVVSGWGTTCFLFCSSPDTLQKVEVDLLHYKDCAADTYNYG 189
            ..:...:..:.:||.....|.|:..:::||||.. |....|..||.:||:.:.::.|.|...|  
  Fly   126 ESIVFDNATQPVELDHEALVPGSRLLLTGWGTLS-LGGDVPARLQSLEVNYVPFEQCRAAHDN-- 187

  Fly   190 SDSILETMVCATGEK-KDACQGDSGGPLVADNKLVGVVSWGSGCAWTGYPGVYADVASLRSWI-- 251
            |..:....||...:| :.||.||||||||.:.|||.:|:||..|| .|||..:|.::....:|  
  Fly   188 STRVDIGHVCTFNDKGRGACHGDSGGPLVHNGKLVALVNWGLPCA-KGYPDAHASISYYHDFIRT 251

  Fly   252 ---VDTTDS 257
               :..|||
  Fly   252 HLSLSKTDS 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17571NP_610109.1 Tryp_SPc 30..251 CDD:214473 77/230 (33%)
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 77/230 (33%)

Return to query results.
Submit another query.