DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17571 and tmprss4b

DIOPT Version :9

Sequence 1:NP_001286096.1 Gene:CG17571 / 35409 FlyBaseID:FBgn0259998 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_001119849.1 Gene:tmprss4b / 327651 ZFINID:ZDB-GENE-030131-5862 Length:432 Species:Danio rerio


Alignment Length:255 Identity:96/255 - (37%)
Similarity:134/255 - (52%) Gaps:27/255 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ALVALAAS-CHGNPGLDFPFGRIVNGEDVDIENYPYQVSVQTTKGSHFCGGSLIDSETVLTAAHC 73
            ::|:::.| |....|.|    |||.|.:..||::|:|||:|... .|.|||||:.:..:::||||
Zfish   184 SVVSVSCSDCGEVVGED----RIVGGVETSIEHWPWQVSLQFNH-RHMCGGSLLSTSWIISAAHC 243

  Fly    74 M--QSYAASELQVRVGSTSRSSGGEV--VTVRAFKYHEGYNSKLMINDVAIIKLSSPVRQTSKIR 134
            .  ::...|...|.:|.|...   :|  |:|.....|:.||......|:|::||:.||:....|.
Zfish   244 FTGRTQELSRWTVVLGQTKVM---DVVGVSVDMIVIHKDYNRLTNDFDIAMLKLTWPVKTGESIL 305

  Fly   135 AIELADSEAVSGTNAVVSGWGTTCFLFCSS---PDTLQKVEVDLLHYKDCAADTYNYGSDSILET 196
            .:.|...:.......||:|||    |....   |..|||..|.|::..:|:..|..  |.||...
Zfish   306 PVCLPPHQLAIKDMLVVTGWG----LLKEGGALPTVLQKASVPLVNRSECSKPTIY--SSSITPR 364

  Fly   197 MVCA--TGEKKDACQGDSGGPLV---ADNKLVGVVSWGSGCAWTGYPGVYADVASLRSWI 251
            |:||  .....||||||||||||   :..:|:|:||||.|||..|.|||||||..|..||
Zfish   365 MLCAGFLQGNVDACQGDSGGPLVYLSSRWQLIGIVSWGVGCAREGKPGVYADVTQLLDWI 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17571NP_001286096.1 Tryp_SPc 30..251 CDD:214473 89/232 (38%)
Tryp_SPc 31..254 CDD:238113 90/233 (39%)
tmprss4bNP_001119849.1 SRCR_2 100..179 CDD:292133
SRCR 105..>175 CDD:278931
Tryp_SPc 201..424 CDD:214473 89/232 (38%)
Tryp_SPc 202..427 CDD:238113 90/233 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.