DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17571 and tmprss4b

DIOPT Version :10

Sequence 1:NP_610109.1 Gene:CG17571 / 35409 FlyBaseID:FBgn0259998 Length:258 Species:Drosophila melanogaster
Sequence 2:XP_073805980.1 Gene:tmprss4b / 327651 ZFINID:ZDB-GENE-030131-5862 Length:449 Species:Danio rerio


Alignment Length:255 Identity:96/255 - (37%)
Similarity:134/255 - (52%) Gaps:27/255 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ALVALAAS-CHGNPGLDFPFGRIVNGEDVDIENYPYQVSVQTTKGSHFCGGSLIDSETVLTAAHC 73
            ::|:::.| |....|.|    |||.|.:..||::|:|||:|... .|.|||||:.:..:::||||
Zfish   201 SVVSVSCSDCGEVVGED----RIVGGVETSIEHWPWQVSLQFNH-RHMCGGSLLSTSWIISAAHC 260

  Fly    74 M--QSYAASELQVRVGSTSRSSGGEV--VTVRAFKYHEGYNSKLMINDVAIIKLSSPVRQTSKIR 134
            .  ::...|...|.:|.|...   :|  |:|.....|:.||......|:|::||:.||:....|.
Zfish   261 FTGRTQELSRWTVVLGQTKVM---DVVGVSVDMIVIHKDYNRLTNDFDIAMLKLTWPVKTGESIL 322

  Fly   135 AIELADSEAVSGTNAVVSGWGTTCFLFCSS---PDTLQKVEVDLLHYKDCAADTYNYGSDSILET 196
            .:.|...:.......||:|||    |....   |..|||..|.|::..:|:..|..  |.||...
Zfish   323 PVCLPPHQLAIKDMLVVTGWG----LLKEGGALPTVLQKASVPLVNRSECSKPTIY--SSSITPR 381

  Fly   197 MVCA--TGEKKDACQGDSGGPLV---ADNKLVGVVSWGSGCAWTGYPGVYADVASLRSWI 251
            |:||  .....||||||||||||   :..:|:|:||||.|||..|.|||||||..|..||
Zfish   382 MLCAGFLQGNVDACQGDSGGPLVYLSSRWQLIGIVSWGVGCAREGKPGVYADVTQLLDWI 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17571NP_610109.1 Tryp_SPc 30..251 CDD:214473 89/232 (38%)
tmprss4bXP_073805980.1 None

Return to query results.
Submit another query.