DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17571 and Tmprss3

DIOPT Version :10

Sequence 1:NP_610109.1 Gene:CG17571 / 35409 FlyBaseID:FBgn0259998 Length:258 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:234 Identity:90/234 - (38%)
Similarity:114/234 - (48%) Gaps:17/234 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RIVNGEDVDIENYPYQVSVQTTKGSHFCGGSLIDSETVLTAAHCMQS-YAASELQVRVGSTS-RS 92
            |||.|....:..:|:|||:| .:|.|.||||:|....::|||||:.. |......|:||..| ..
  Rat   216 RIVGGNVSSLTQWPWQVSLQ-FQGYHLCGGSVITPLWIVTAAHCVYDLYHPKSWTVQVGLVSLMD 279

  Fly    93 SGGEVVTVRAFKYHEGYNSKLMINDVAIIKLSSPVRQTSKIRAIELADSEA--VSGTNAVVSGWG 155
            |......|....||..|..|.:.||:|::|||.|:.....|:.|.|.:||.  ..|.....||||
  Rat   280 SPVPSHLVEKIIYHSKYKPKRLGNDIALMKLSEPLTFDETIQPICLPNSEENFPDGKLCWTSGWG 344

  Fly   156 TTCFLFCSSPDTLQKVEVDLLHYKDC-AADTYNYGSDSILETMVCATGEKK---DACQGDSGGPL 216
            .|......:...|....|.|:..|.| ..|.|   ...|..:|:|| |..|   |:|||||||||
  Rat   345 ATEDGAGDASPVLNHAAVPLISNKICNHRDVY---GGIISPSMLCA-GYLKGGVDSCQGDSGGPL 405

  Fly   217 VADN----KLVGVVSWGSGCAWTGYPGVYADVASLRSWI 251
            |...    ||||..|:|.|||....||||..:.|...||
  Rat   406 VCQERRLWKLVGATSFGIGCAEVNKPGVYTRITSFLDWI 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17571NP_610109.1 Tryp_SPc 30..251 CDD:214473 88/232 (38%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060
SRCR_2 112..211 CDD:464747
Tryp_SPc 216..444 CDD:214473 88/232 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.