DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv3 and atp1b1b

DIOPT Version :10

Sequence 1:NP_001260675.1 Gene:nrv3 / 35408 FlyBaseID:FBgn0032946 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_571746.1 Gene:atp1b1b / 64273 ZFINID:ZDB-GENE-001127-4 Length:302 Species:Danio rerio


Alignment Length:325 Identity:104/325 - (32%)
Similarity:140/325 - (43%) Gaps:70/325 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GFKKFLWNSETSQCLGRTGSSWAKILLFYIIFYAALTGFFAAIFTVFYQTLDNEKPKWMLDNGLI 85
            |:|||:||||..:.|||||.|||||.|||:|||..|.|.|.....:...||.:.||.|.      
Zfish    10 GWKKFVWNSEKKEFLGRTGGSWAKIFLFYLIFYGCLAGIFIGTIQILLLTLSDYKPTWQ------ 68

  Fly    86 GSNPGLGFRPMPPEANVESTLVWYESSKKDNYKYWVDETSRFLKY-------HTYQDLEKQNQVN 143
                   .|..||      .|..:..|.|......:|:...||.|       .|..|.|||.. |
Zfish    69 -------DRVAPP------GLTHFPRSDKSEIAINLDDEVSFLNYVKVMREFLTSYDQEKQLD-N 119

  Fly   144 CSFEH---PPQDDK-------------VCGIDFSSFSPCTA--DNNFGYHVARPCIFLKLNKIYN 190
            ..||:   .|.|.|             .|........||:.  |..||:...:||:..|||:|.|
Zfish   120 MQFENCGESPLDYKNRGDLESDVGVRRACQFSREWLGPCSGLDDPYFGFKEGKPCLIAKLNRIVN 184

  Fly   191 WIPE--IYNDSKTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARDYYP-RM 252
            :.|:  :.|:|      :|||: || |.:..|.|       :.|..:...|...:....||. ..
Zfish   185 FRPKPPVSNES------IPEEV-QH-KVQPYLIP-------IHCTNKKEEDAGKLGEVRYYGFGG 234

  Fly   253 GFPRYYFPF--KNIQ-GYIPPIVAVQF-TVETGVLINIECKAWARNINHDRSDR---RGSVHFEL 310
            |||..|:|:  |.:. .|:.|:||:|| .:.....:.||||.:..||.:...||   |..|.|.:
Zfish   235 GFPLQYYPYYGKLLHPQYLQPLVAIQFLNITPNTDMRIECKVYGENIYYHDKDRYQGRFDVKFNI 299

  Fly   311  310
            Zfish   300  299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv3NP_001260675.1 Na_K-ATPase 18..307 CDD:459748 102/320 (32%)
atp1b1bNP_571746.1 Na_K-ATPase 5..301 CDD:471796 104/325 (32%)

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