DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv3 and atp1b3b

DIOPT Version :10

Sequence 1:NP_001260675.1 Gene:nrv3 / 35408 FlyBaseID:FBgn0032946 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_571745.1 Gene:atp1b3b / 64272 ZFINID:ZDB-GENE-001127-1 Length:275 Species:Danio rerio


Alignment Length:320 Identity:91/320 - (28%)
Similarity:135/320 - (42%) Gaps:79/320 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KMGKWEGFKKFLWNSETSQCLGRTGSSWAKILLFYIIFYAALTGFFAAIFTVFYQTLDNEKPKWM 79
            |...|   |.|::|..|.:.:|||.||||.|.|||::||..|.|.|.....|..||||:..||:.
Zfish    11 KQSSW---KDFIYNPRTGEFIGRTASSWALIFLFYLVFYGFLAGMFTLTMWVMLQTLDDHTPKYR 72

  Fly    80 LDNGLIGSNPGLGFRPMPPEANVESTLVWYESSKKDNYKYWVDETSRFLKYHTYQD-LEKQN--- 140
             |.   .:||||..||       .|..:.:..|....|..:|.....||:  :|.| |::.|   
Zfish    73 -DR---VANPGLMIRP-------RSLDIAFNRSIPQQYSKYVQHLEAFLQ--SYNDSLQEANEPC 124

  Fly   141 QVNCSFEHPPQDD----KVCGIDFSSFSPCT--ADNNFGYHVARPCIFLKLNKIYNWIPEIYNDS 199
            |....||   |||    |||....|....|:  :|..|||....|||.:|:|::.          
Zfish   125 QEGMYFE---QDDVEEKKVCQFKRSQLRQCSGLSDTTFGYSEGNPCIIVKMNRVI---------- 176

  Fly   200 KTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARDYYPRMG-FPRYYFPF-- 261
                               .|:|.....:..:.:|:....::      .||..| ..:.:||:  
Zfish   177 -------------------GLKPRGDPHIACTVKGDGTLQMQ------LYPDEGKIDKSFFPYYG 216

  Fly   262 ----KNIQGYIPPIVAVQFTV---ETGVLINIECKAWARN-INHDRSDR-RGSVHFELMV 312
                ||   |:.|:|||:..:   :..:...:|||....: :|:|..|: .|.|.|.:.|
Zfish   217 KILHKN---YVQPLVAVKLMLGENDYNIEHTVECKVEGSDLLNNDERDKFLGRVTFRINV 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv3NP_001260675.1 Na_K-ATPase 18..307 CDD:459748 87/310 (28%)
atp1b3bNP_571745.1 Na_K-ATPase 6..268 CDD:459748 88/313 (28%)

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