DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nrv3 and atp1b1a

DIOPT Version :10

Sequence 1:NP_001260675.1 Gene:nrv3 / 35408 FlyBaseID:FBgn0032946 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_571743.3 Gene:atp1b1a / 64267 ZFINID:ZDB-GENE-001127-3 Length:306 Species:Danio rerio


Alignment Length:322 Identity:96/322 - (29%)
Similarity:150/322 - (46%) Gaps:61/322 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GFKKFLWNSETSQCLGRTGSSWAKILLFYIIFYAALTGFFAAIFTVFYQTLDNEKPKWMLDNGLI 85
            |:|.|:|||:..:.|||||.||.||.:||:|||..|.|.|.........||.|.||.:. |.   
Zfish    10 GWKSFIWNSDKKEFLGRTGCSWLKIFIFYVIFYGCLAGIFIGTIQAMLLTLSNYKPTYQ-DR--- 70

  Fly    86 GSNPGLGFRPMPPEANVESTLVWYESSKKDNYKYWVDETSRFLKYHTYQDLEKQNQVNCSFEH-- 148
            .:.|||...|.|.:|.:.     |..:.:..|..:|:....|||.:. :|::|.   :..||.  
Zfish    71 VAPPGLSHSPRPDKAEIN-----YNINDESTYLPYVNHIDAFLKAYN-EDVQKD---DTKFEECG 126

  Fly   149 -PPQ----------DD---KVCGIDFSSFSPCTAD-----NNFGYHVARPCIFLKLNKIYNWIPE 194
             .||          |:   |.|.........|:..     .|:|:...:||:.:|||:|.|::|.
Zfish   127 DKPQFYTDRGELESDNGVRKACRFRREWLGECSGQKDEKLKNYGFDDGQPCLIVKLNRIVNFMPR 191

  Fly   195 --IYNDSKTLPDHMPEELKQHIKEKQSLRPN-ETNVVWVSCEGENPADVENIKARDYYP-RMGFP 255
              ..|||      :||          ::||. :.||:.:.|..:...:...:....|:. ..|||
Zfish   192 PPASNDS------IPE----------AVRPKLQGNVIPIHCSSKREEEANLLGQIKYFGLGTGFP 240

  Fly   256 RYYFPF--KNIQ-GYIPPIVAVQF-TVETGVLINIECKAWARNINH---DRSDRRGSVHFEL 310
            ..|:|:  |.:| .|:.|:||::| .:.|.|.:.:|||.:..||::   |||..|..:.|.:
Zfish   241 LQYYPYYGKLLQPQYLQPLVAIKFYNITTDVDVRVECKVYGENIDYSEKDRSQGRFDIKFTI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv3NP_001260675.1 Na_K-ATPase 18..307 CDD:459748 95/317 (30%)
atp1b1aNP_571743.3 Na_K-ATPase 8..303 CDD:471796 96/322 (30%)

Return to query results.
Submit another query.