DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nrv3 and atp1b1

DIOPT Version :9

Sequence 1:NP_001260675.1 Gene:nrv3 / 35408 FlyBaseID:FBgn0032946 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001016488.1 Gene:atp1b1 / 548592 XenbaseID:XB-GENE-482813 Length:304 Species:Xenopus tropicalis


Alignment Length:328 Identity:99/328 - (30%)
Similarity:147/328 - (44%) Gaps:76/328 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GFKKFLWNSETSQCLGRTGSSWAKILLFYIIFYAALTGFFAAIFTVFYQTLDNEKPKWMLDNGLI 85
            |::||:||.:..:.|||||.||.||||||:|||..|.|.|.....|...|:...:||:. |.   
 Frog    12 GWRKFIWNPDKKEFLGRTGGSWFKILLFYLIFYGCLAGIFIGTIQVLLLTISEYEPKYQ-DR--- 72

  Fly    86 GSNPGLGFRPMPPEANVESTLVWYESSKKDNYKYWVDETSRFL-KYHTYQDLEKQNQVNCSFEH- 148
            .:.|||...|...:..:.     :..:..|:|..:|....:|: ||      ..:|||:..||. 
 Frog    73 VAPPGLTQVPKAVKTEIN-----FSPNDPDSYNDYVQSMEKFISKY------SNENQVSDKFEDC 126

  Fly   149 ---PPQ------------DDKVC-----------GIDFSSFSPCTADNNFGYHVARPCIFLKLNK 187
               |.|            ..|.|           |||         |..||:...:||:.:|||:
 Frog   127 GTMPGQYRERGGLNKDGGQKKSCVFRRQWLQNCSGID---------DQTFGFAEGKPCVIVKLNR 182

  Fly   188 IYNWIPEIYNDSKTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARDYYPR- 251
            |..:.| :...:.:||..|......:             |:.:.|:|:...|:.||:...||.. 
 Frog   183 IVAFKP-VPPQNNSLPPEMTANYNPY-------------VIPIHCQGKRDEDIPNIREVKYYGMG 233

  Fly   252 --MGFPRYYFPF--KNIQ-GYIPPIVAVQFTVET-GVLINIECKAWARNINHDRSDR---RGSVH 307
              .|||..|:|:  |.:| .|:.|::|||||..| ...|.|||||:..||::...||   |..:.
 Frog   234 GFAGFPLNYYPYYGKLLQPEYLQPLIAVQFTNLTFNTEIRIECKAYGENIDYHDKDRFQGRFDIK 298

  Fly   308 FEL 310
            |::
 Frog   299 FDI 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv3NP_001260675.1 Na_K-ATPase 20..307 CDD:395224 98/323 (30%)
atp1b1NP_001016488.1 Na_K_ATPase_bet 1..303 CDD:273446 99/328 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 124 1.000 Domainoid score I5426
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H37509
Inparanoid 1 1.050 124 1.000 Inparanoid score I4563
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm9519
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4478
SonicParanoid 1 1.000 - - X254
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

Return to query results.
Submit another query.