DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv3 and nrv2

DIOPT Version :9

Sequence 1:NP_001260675.1 Gene:nrv3 / 35408 FlyBaseID:FBgn0032946 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001014475.1 Gene:nrv2 / 33953 FlyBaseID:FBgn0015777 Length:323 Species:Drosophila melanogaster


Alignment Length:310 Identity:156/310 - (50%)
Similarity:209/310 - (67%) Gaps:4/310 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EYYAPPVKMGKWEGFKKFLWNSETSQCLGRTGSSWAKILLFYIIFYAALTGFFAAIFTVFYQTLD 72
            :||:.|.:..|.:..|:.:::||.:...||:..|||||.:||:.||..|....|.....|:||||
  Fly    14 QYYSRPPERPKKKSLKQMVYDSEDNSYFGRSMDSWAKIGIFYVAFYGVLAALVAICMWAFFQTLD 78

  Fly    73 NEKPKWMLDNGLIGSNPGLGFRPMPPEANVESTLVWYESSKKDNYKYWVDETSRFLKYHTYQDL- 136
            ...|||.||..|||:||||||||:||..||||||:||:.::.:|||:|.|....||..:....| 
  Fly    79 PRIPKWTLDRSLIGTNPGLGFRPLPPVDNVESTLIWYKGTQHENYKHWTDSLDDFLAVYKVPGLT 143

  Fly   137 --EKQNQVNCSFEHPPQDDKVCGIDFSSFSPCTADNNFGYHVARPCIFLKLNKIYNWIPEIYNDS 199
              ..||..||.:..||...:||.:|..::||||.:||:.||.:.|||||||||||.||||.||.|
  Fly   144 PGRGQNIYNCDYNQPPPKGQVCDVDIKTWSPCTKENNYSYHKSAPCIFLKLNKIYGWIPEYYNRS 208

  Fly   200 KTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARDYYPRMGFPRYYFPFKNI 264
            ..||.:||..||.:|.|.:..:|.:.|.:|||||||||||.|||.|.:|.|..|||.|::|::|.
  Fly   209 NDLPANMPASLKTYIAEVEKTQPEKLNTIWVSCEGENPADQENIGAVNYLPIRGFPGYFYPYQNS 273

  Fly   265 QGYIPPIVAVQF-TVETGVLINIECKAWARNINHDRSDRRGSVHFELMVD 313
            :||:.|:|||.| ..:.|::||:||:||||||.|||.:|.||||:||::|
  Fly   274 EGYLSPLVAVHFQRPKRGIIINVECRAWARNIIHDRKERIGSVHYELLID 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv3NP_001260675.1 Na_K-ATPase 20..307 CDD:395224 147/290 (51%)
nrv2NP_001014475.1 Na_K-ATPase 24..317 CDD:278704 148/292 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473142
Domainoid 1 1.000 125 1.000 Domainoid score I5399
eggNOG 1 0.900 - - E1_KOG3927
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 125 1.000 Inparanoid score I4678
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D40668at7147
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm6361
orthoMCL 1 0.900 - - OOG6_104632
Panther 1 1.100 - - P PTHR11523
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X254
1110.800

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