DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv3 and atp1b3a

DIOPT Version :10

Sequence 1:NP_001260675.1 Gene:nrv3 / 35408 FlyBaseID:FBgn0032946 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_571296.2 Gene:atp1b3a / 30468 ZFINID:ZDB-GENE-990415-167 Length:278 Species:Danio rerio


Alignment Length:312 Identity:89/312 - (28%)
Similarity:139/312 - (44%) Gaps:74/312 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FKKFLWNSETSQCLGRTGSSWAKILLFYIIFYAALTGFFAAIFT----VFYQTLDNEKPKWMLDN 82
            :|..::|..|.:..|||..:|..|||||::||    ||.||:|.    |..|||:::.||:. |.
Zfish    18 WKDAIYNPRTGELFGRTARNWGLILLFYLVFY----GFLAAMFVFTLWVMLQTLNDDTPKYR-DR 77

  Fly    83 GLIGSNPGLGFRPMPPEANVESTLVWYESSKKDNYKYWVDETSRFLKYHTYQDLEK-QNQVNCSF 146
               .::|||..|  |...|:|     :..|....|..:|.....||  |.|.|.|: :|.:..:.
Zfish    78 ---VASPGLVIR--PNSLNIE-----FNRSDPLEYGQYVQHLESFL--HQYNDSEQAKNDLCMAG 130

  Fly   147 EHPPQD----DKVCGIDFSSFSPCTA--DNNFGYHVARPCIFLKLNKIYNWIPEIYNDSKTLPDH 205
            ::..||    .|||....|....|:.  |..|||...:||:.:|:|:|.                
Zfish   131 QYSEQDGESLKKVCQFKRSLLYSCSGMEDTTFGYAKGQPCVIVKMNRII---------------- 179

  Fly   206 MPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARDYYPRMG-FPRYYFPF---KNIQG 266
                         .|:|:....:..:.:...|..::      |:|..| ..|.|||:   |..:|
Zfish   180 -------------GLKPSGDPYINCTSKSVKPLQMQ------YFPHEGTIDRMYFPYYGKKTHKG 225

  Fly   267 YIPPIVAVQFTVE----TGVLINIECKAWARNI-NHDRSDR-RGSVHFELMV 312
            |:.|:|||:..::    ...|| :|||....|: |:|..|: .|.|.|.::|
Zfish   226 YVQPLVAVKLLLKKEDYNSELI-VECKVEGSNLKNNDERDKFLGRVTFRVLV 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv3NP_001260675.1 Na_K-ATPase 18..307 CDD:459748 86/305 (28%)
atp1b3aNP_571296.2 Na_K-ATPase 10..271 CDD:459748 86/305 (28%)

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