DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv3 and Atp1b3

DIOPT Version :9

Sequence 1:NP_001260675.1 Gene:nrv3 / 35408 FlyBaseID:FBgn0032946 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_037045.1 Gene:Atp1b3 / 25390 RGDID:2172 Length:279 Species:Rattus norvegicus


Alignment Length:318 Identity:98/318 - (30%)
Similarity:147/318 - (46%) Gaps:76/318 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MGKWEGFKKFLWNSETSQCLGRTGSSWAKILLFYIIFYAALTGFFAAIFT----VFYQTLDNEKP 76
            :.:|   |.|::|..:.:.||||..||..|||||::||    ||.||:||    |..|||::|.|
  Rat    13 LAEW---KLFIYNPTSGEFLGRTSKSWGLILLFYLVFY----GFLAALFTFTMWVMLQTLNDEVP 70

  Fly    77 KWMLDNGLIGSNPGLGFRPMPPEANVESTLVWYESSKKDNYKYWVDETSRFLKYHTYQDLEKQNQ 141
            |:   ...|.| |||...|.||.| ::.|   |..|....||.:|::...|||.::.:  |::|.
  Rat    71 KY---RDQIPS-PGLMVFPKPPTA-LDYT---YSMSDPHTYKKFVEDLKNFLKPYSVE--EQKNL 125

  Fly   142 VNCS----FEHPPQDDKVCGIDFSSFSPCTA--DNNFGYHVARPCIFLKLNKIYNWIPEIYNDSK 200
            .:|.    |.....|...|....|....|:.  |:||||...:||:.:|:|:|.          :
  Rat   126 TDCPGGALFHQEGPDYSACQFPVSLLQECSGVNDSNFGYSKGQPCVLVKMNRII----------E 180

  Fly   201 TLPDHMPEELKQHIKEKQSLRPNETNVVWVSC--EGENPADVENIKARDYYPRMG-FPRYYFPF- 261
            .:||..|                     :::|  :.||.|::..      ||..| ....|||: 
  Rat   181 LVPDGAP---------------------YITCITKEENIANIVT------YPDDGLIDLKYFPYY 218

  Fly   262 --KNIQGYIPPIVAVQ--FTVE-TGVLINIECKA-WARNI--NHDRSDRRGSVHFELM 311
              |...||..|:||||  |..: |...:.|||:. ..||:  .::|....|.|.|:::
  Rat   219 GKKRHVGYRQPLVAVQVIFGADATKKEVTIECQIDGTRNLKNKNERDKFLGRVSFKVI 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv3NP_001260675.1 Na_K-ATPase 20..307 CDD:395224 95/308 (31%)
Atp1b3NP_037045.1 Na_K_ATPase_bet 1..279 CDD:273446 98/318 (31%)
immunoglobulin-like. /evidence=ECO:0000250 186..279 30/118 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45736
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm9102
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X254
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.930

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