DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nrv3 and nkb-1

DIOPT Version :9

Sequence 1:NP_001260675.1 Gene:nrv3 / 35408 FlyBaseID:FBgn0032946 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_492506.1 Gene:nkb-1 / 182726 WormBaseID:WBGene00007646 Length:320 Species:Caenorhabditis elegans


Alignment Length:310 Identity:103/310 - (33%)
Similarity:159/310 - (51%) Gaps:42/310 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EGFKKFLWNSETSQCLGRTGSSWAKILLFYIIFYAALTGFFAAIFTVFYQTLDNEKPKWMLDNGL 84
            |.|::||:|.:....:||||.||.:|::|||||||.|..|:....|:|.:|||.:.|::.....:
 Worm    27 ETFREFLYNKKNGTVMGRTGKSWFQIIVFYIIFYAFLAAFWLTCLTIFMKTLDPKVPRFYGKGTI 91

  Fly    85 IGSNPGLGFRPMPPEANVESTLVWYESSKKDNYKYWVDETSRFL-KY-------------HTYQD 135
            ||.|||:|::|...| ..:|||:.|....:.:||.::::...:| ||             .:..|
 Worm    92 IGVNPGVGYQPWLKE-RPDSTLIKYNLRDQKSYKAYLEQMKTYLTKYDSNATETRECGAGDSNDD 155

  Fly   136 LEKQNQVNCSFEHPPQDDKVCGIDFSSFSP-CTADNNFGYHVARPCIFLKLNKIYNWIPEIYNDS 199
            |||.           .|...|..|.|.|.. |:..::|||...:||:.:.||::..|.|..|.::
 Worm   156 LEKN-----------PDALPCRFDLSVFDKGCSEKSDFGYKSGKPCVIISLNRLIGWRPTDYQEN 209

  Fly   200 KTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARDYYPRMGFPRYYFPFKNI 264
            .     :|||:|...|         ...:.::|.|....|.|:|....|.|..|....|:|:...
 Worm   210 S-----VPEEVKDRYK---------AGSIAINCRGATNVDQEHIGKVTYMPSNGIDGRYYPYVFT 260

  Fly   265 QGYIPPIVAVQF-TVETGVLINIECKAWARNINHDRSDRRGSVHFELMVD 313
            :||..||..|:| |:....|:.:||:|:|.||.||.|.|.|.|:||:||:
 Worm   261 KGYQQPIAMVKFDTIPRNKLVIVECRAYALNIEHDISSRLGMVYFEVMVE 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv3NP_001260675.1 Na_K-ATPase 20..307 CDD:395224 98/302 (32%)
nkb-1NP_492506.1 Na_K-ATPase 27..303 CDD:278704 98/301 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167882
Domainoid 1 1.000 177 1.000 Domainoid score I2145
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 183 1.000 Inparanoid score I2625
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45736
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm4764
orthoMCL 1 0.900 - - OOG6_104632
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4478
SonicParanoid 1 1.000 - - X254
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.840

Return to query results.
Submit another query.