DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nrv3 and Atp1b1

DIOPT Version :9

Sequence 1:NP_001260675.1 Gene:nrv3 / 35408 FlyBaseID:FBgn0032946 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_033851.1 Gene:Atp1b1 / 11931 MGIID:88108 Length:304 Species:Mus musculus


Alignment Length:324 Identity:102/324 - (31%)
Similarity:153/324 - (47%) Gaps:61/324 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GKWEGFKKFLWNSETSQCLGRTGSSWAKILLFYIIFYAALTGFFAAIFTVFYQTLDNEKPKWMLD 81
            |.|   |||:||||..:.|||||.||.||||||:|||..|.|.|.....|...|:...||.:. |
Mouse    10 GSW---KKFIWNSEKKEFLGRTGGSWFKILLFYVIFYGCLAGIFIGTIQVMLLTISELKPTYQ-D 70

  Fly    82 NGLIGSNPGLGFRPMPPEANVESTLVWYESSKKDNYKYWVDETSRFLKYHTYQDLEKQNQV---N 143
            .   .:.|||...|     .::.|.:.:..:...:|:.:|....|||:  .|:|..:::.:   :
Mouse    71 R---VAPPGLTQIP-----QIQKTEISFRPNDPKSYEAYVLNIIRFLE--KYKDSAQKDDMIFED 125

  Fly   144 C-----------SFEHPPQDDKVCGIDFSSFSPCTA--DNNFGYHVARPCIFLKLNKIYNWIPE- 194
            |           ...|...:.|||.........|:.  |:::||...:|||.:|||::..:.|: 
Mouse   126 CGNVPSEPKERGDINHERGERKVCRFKLDWLGNCSGLNDDSYGYREGKPCIIIKLNRVLGFKPKP 190

  Fly   195 IYNDS-KTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARDYYPR---MGFP 255
            ..|:| :|.|..|            ...|   ||:.|.|.|:...|.:.:...:|:..   .|||
Mouse   191 PKNESLETYPLMM------------KYNP---NVLPVQCTGKRDEDKDKVGNIEYFGMGGYYGFP 240

  Fly   256 RYYFPF--KNIQ-GYIPPIVAVQF---TVETGVLINIECKAWARNINHDRSDR---RGSVHFEL 310
            ..|:|:  |.:| .|:.|::||||   ||:|.  |.:||||:..||.:...||   |..|..|:
Mouse   241 LQYYPYYGKLLQPKYLQPLLAVQFTNLTVDTE--IRVECKAYGENIGYSEKDRFQGRFDVKIEI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv3NP_001260675.1 Na_K-ATPase 20..307 CDD:395224 98/316 (31%)
Atp1b1NP_033851.1 Na_K_ATPase_bet 1..304 CDD:273446 102/324 (31%)
immunoglobulin-like. /evidence=ECO:0000250 191..304 41/129 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 135 1.000 Domainoid score I4946
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37509
Inparanoid 1 1.050 135 1.000 Inparanoid score I4549
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45736
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm8856
orthoMCL 1 0.900 - - OOG6_104632
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4478
SonicParanoid 1 1.000 - - X254
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.