DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv3 and atp1b2b

DIOPT Version :9

Sequence 1:NP_001260675.1 Gene:nrv3 / 35408 FlyBaseID:FBgn0032946 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_571913.1 Gene:atp1b2b / 114457 ZFINID:ZDB-GENE-010718-1 Length:292 Species:Danio rerio


Alignment Length:316 Identity:93/316 - (29%)
Similarity:136/316 - (43%) Gaps:57/316 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GFKKFLWNSETSQCLGRTGSSWAKILLFYIIFYAALTGFFAAIFTVFYQTLDNEKPKWMLDNGLI 85
            |:|:|.||..|.:..|||.|||..|||||:.||..|.|.|.....|..||||:.:|.:  .:.| 
Zfish     8 GWKEFFWNPRTREFCGRTASSWGLILLFYLAFYIFLAGLFTLTMYVMLQTLDDHRPTY--QDRL- 69

  Fly    86 GSNPGLGFRPMPPEANVESTLVWYESSKKDNYKYWVDETSRFLKYHTYQDLEKQNQVNCSFEHPP 150
             |.||:..||...:..:.     |.:...:.::.:|...:.||.  .|.| ..|.|.|  :|..|
Zfish    70 -STPGMMIRPKGEQLEIA-----YTTEYTETWERYVQALNNFLS--PYND-TVQTQKN--YECKP 123

  Fly   151 -----QDD---------KVCGIDFSSFSPCT--ADNNFGYHVARPCIFLKLNKIYNWIPEIYNDS 199
                 |:|         :.|....|....|:  .|..:||...:|||.:|||::...:|      
Zfish   124 DQFFIQEDSGGLKNFPKRSCQFKRSILEKCSGITDRFYGYDEGKPCIIIKLNRVIGLLP------ 182

  Fly   200 KTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARDYYPRMG-FPRYYFPF-- 261
              ..|..|..:....| |..:..:|    |..       |.:.:....|||..| |...|:|:  
Zfish   183 --AKDGQPPYVTCGAK-KYKVGKDE----WTD-------DSDKLGELAYYPPNGTFNLMYYPYYG 233

  Fly   262 KNIQ-GYIPPIVAVQF-TVETGVLINIECKAWARNI--NHDRSDRRGSVHFELMVD 313
            |..| .|..|:|||:| .:.....:|:|||..:.||  ..:|....|.|.|.|.::
Zfish   234 KKAQVNYSQPLVAVKFLNITRNEDVNVECKINSNNIPEGSERDKFAGRVSFTLRIN 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv3NP_001260675.1 Na_K-ATPase 20..307 CDD:395224 90/308 (29%)
atp1b2bNP_571913.1 Na_K-ATPase 7..283 CDD:278704 90/308 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 125 1.000 Domainoid score I5399
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 125 1.000 Inparanoid score I4678
OMA 1 1.010 - - QHG45736
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm6361
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4478
SonicParanoid 1 1.000 - - X254
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1313.010

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