DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv3 and atp1b4

DIOPT Version :10

Sequence 1:NP_001260675.1 Gene:nrv3 / 35408 FlyBaseID:FBgn0032946 Length:313 Species:Drosophila melanogaster
Sequence 2:XP_002931848.1 Gene:atp1b4 / 100490400 XenbaseID:XB-GENE-975977 Length:317 Species:Xenopus tropicalis


Alignment Length:316 Identity:84/316 - (26%)
Similarity:136/316 - (43%) Gaps:64/316 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GKW-EGFKKFLWNSETSQCLGRTGSSWAKILLFYIIFYAALTGFFAAIFTVFYQTLDNEKPKW-- 78
            |:| :..|.|:||.|..:.|||...|||.|||||.:.|..|.|.||........|:....|.:  
 Frog    45 GEWIQDMKHFIWNPEKKEVLGRDKRSWALILLFYSVLYCFLAGMFALCMYGLLATISPYVPTYRE 109

  Fly    79 -MLDNGLIGSNPGLGFRPMPPEANVESTLVWYESSKKDNYKYWVDETSRFLKYHTYQD-LEKQNQ 141
             :..       |||..|   |:||  :....:.||::..:..:.:..:.||:  .|.| .:|:..
 Frog   110 RVFP-------PGLTIR---PQAN--ALYFAFNSSERSTWSSYAESLNTFLE--DYNDETQKEKN 160

  Fly   142 VNCS----FEHPPQDD---KVCGIDFSSFSPCTA--DNNFGYHVARPCIFLKLNKIYNWIPEIYN 197
            :.|:    |..|.:|.   |.|....|....|:.  |.:||:...:|||.:|:|:|..     |.
 Frog   161 LVCTPGKYFLQPGEDHEERKACQFSRSLLRNCSGIEDPSFGFAQGKPCILIKMNRILG-----YQ 220

  Fly   198 DSKTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARDYYPRMGFPRYYFPF- 261
            ....:|                        ::|:|| ...||:..:....:||...|...|:|: 
 Frog   221 AGSGIP------------------------IYVTCE-VLKADMSYLGPISFYPSDKFDLMYYPYY 260

  Fly   262 --KNIQGYIPPIVAVQFT-VETGVLINIECKAWARNI--NHDRSDRRGSVHFELMV 312
              .....|..|::|:||| |:....:|::||...::|  :|::....|.|.|.|.:
 Frog   261 GKLTHVNYTSPLIAMQFTGVKRNEDVNVQCKINGKDIISDHEKDRFLGRVAFTLHI 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv3NP_001260675.1 Na_K-ATPase 18..307 CDD:459748 80/308 (26%)
atp1b4XP_002931848.1 Na_K-ATPase 41..310 CDD:459748 81/308 (26%)

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