DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and cd63l

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001037906.1 Gene:cd63l / 733515 XenbaseID:XB-GENE-22164536 Length:244 Species:Xenopus tropicalis


Alignment Length:233 Identity:60/233 - (25%)
Similarity:105/233 - (45%) Gaps:7/233 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWTAPIILMIVGAAVAVICFLG 70
            |.|:|....|..|||.:||:.:..:|..|||.....|..:|:....||::|.:.|..:.::...|
 Frog    10 LLCLKAGLLFIILLFWVTGVALICLGATVQLRLTDISVVLSETSSGAPLVLTVTGIIIFIMSGFG 74

  Fly    71 CCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYKERADYRDAW 135
            ....|||::.:|.:|..:.||||:.||.:|::.|.....|...:..:|...:..|........:.
 Frog    75 AISVLKENNMLIKTFIGIMVVIFIIEIIVGISAYSYREKLQSDISRRFQQILSKYGIDGQLTRSL 139

  Fly   136 TLLQTELDCCGINGPNDWETV---YRNSTLPAACCSVINLSEAKECTNTHATQ---HGCLQKLLE 194
            ...|.|..|||.....||..|   ...|::|.:||..:. .:..|....|...   .||:.|:..
 Frog   140 DYAQQEFRCCGAQNFTDWMNVTVTLLPSSVPKSCCRKVT-PKCGEKVMAHQDNIFLEGCVIKMKT 203

  Fly   195 ILDSKTLILASVVLGVAGIQMLTILFACCLYRSFRRSY 232
            .:.....::.:|.:|:..:|:..||.:..|.:..:.:|
 Frog   204 WISQHIDVIGAVGVGLGFVQLFGILLSFLLVKILQENY 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 57/222 (26%)
tetraspanin_LEL 131..>167 CDD:351888 10/38 (26%)
cd63lNP_001037906.1 Tetraspanin 13..235 CDD:459767 57/222 (26%)
tetraspanin_LEL 108..209 CDD:351888 21/101 (21%)

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