DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and tspan36

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001037876.1 Gene:tspan36 / 733459 XenbaseID:XB-GENE-5730963 Length:240 Species:Xenopus tropicalis


Alignment Length:240 Identity:59/240 - (24%)
Similarity:98/240 - (40%) Gaps:22/240 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LTFFCNLLFALTGLLIFL--------VGGMVQLNYAHYSNFVSD-HVWTAPIILMIVGAAVAVIC 67
            :..|.:..|.|...||||        ||....:.|..|.|.:.: :|....:|::.:...:.||.
 Frog     3 IALFTSKTFLLLVSLIFLAASVGLAYVGISTIVTYKQYENLLGNMYVMLPSVIILAIAVVMFVIA 67

  Fly    68 FLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYKERADYR 132
            .||||...:||.|.:..|..|..:||...:...:.|.|....::..:|...::..:.|.......
 Frog    68 ILGCCSTTQESCCGLGCFMFLISIIFAAGVAAMILGLVFVDKINPELEKNMDNLFKTYNGVDVSS 132

  Fly   133 DAWTLLQTELDCCGINGPNDWETV--YR-NSTLPAACCSVINLSEAKECTNTHATQ-----HGCL 189
            .....:|..|:|||.....|||..  |: |.:||.:||.    ..|::|......|     ..|.
 Frog   133 STVDFIQERLECCGRKNYTDWEETDWYQTNKSLPMSCCK----KNAQDCQRVIGQQKDIYTEACE 193

  Fly   190 QKLLEILDSKTLILASVVLGVAGIQMLTILFACCL-YRSFRRSYD 233
            .||..::.........|:||.|.:::..::..|.: .|..|..|:
 Frog   194 PKLENLIHQVLRYSMFVILGFAIVELFAMISICVISCRPARHRYE 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 56/231 (24%)
tetraspanin_LEL 131..>167 CDD:351888 12/38 (32%)
tspan36NP_001037876.1 Tetraspanin 8..230 CDD:459767 55/225 (24%)
tetraspanin_LEL 103..205 CDD:351888 24/105 (23%)

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