DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and TSPAN4

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001426622.1 Gene:TSPAN4 / 7106 HGNCID:11859 Length:330 Species:Homo sapiens


Alignment Length:235 Identity:72/235 - (30%)
Similarity:115/235 - (48%) Gaps:18/235 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASGGLTCVKYLTFFCNLLFALTGLLIFLVG---GMVQLNYAHY-SNFVSDHVWTAPIILMIVGA 61
            ||...|..||||.|..||||.|.|..:..||   ...|.::|.. |:|.|   .:|..:|:|.||
Human    93 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPS---LSAANLLIITGA 154

  Fly    62 AVAVICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYK 126
            .|..|.|:||.||:||:.|::|:|.||.:::||.|..:.:..:.....:.:..:......:..|.
Human   155 FVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYG 219

  Fly   127 ERAD--YRDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECTNTHAT----Q 185
            .:.:  ..:||:::||:..|||::...||..||..:.:|.:||     .|..|....||.    :
Human   220 TQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCC-----LEFSESCGLHAPGTWWK 279

  Fly   186 HGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCLY 225
            ..|.:.:...|....|.:....|..|.:|:|.:.||..:|
Human   280 APCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMY 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 69/227 (30%)
tetraspanin_LEL 131..>167 CDD:351888 12/35 (34%)
TSPAN4NP_001426622.1 None

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