DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp39D and TSPAN8

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_004607.1 Gene:TSPAN8 / 7103 HGNCID:11855 Length:237 Species:Homo sapiens


Alignment Length:235 Identity:69/235 - (29%)
Similarity:122/235 - (51%) Gaps:17/235 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SGGLTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHV----WTAPIILMIVGAAV 63
            :|...|:||..|..|.||.|.|:||..:...|:::....:.|.|:.|    :.|..||:.|||.:
Human     2 AGVSACIKYSMFTFNFLFWLCGILILALAIWVRVSNDSQAIFGSEDVGSSSYVAVDILIAVGAII 66

  Fly    64 AVICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIM-ESQFNST---MQH 124
            .::.|||||||:|||.||:|.|.:..::|.|.::..|:.|.|..:...:|: |:.:.:|   ...
Human    67 MILGFLGCCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIVNETLYENTKLLSAT 131

  Fly   125 YKERADYRDAWTLLQTELDCCG-INGPNDWETVYRNSTLPAACCSVINLSEAKECTNTHATQ--- 185
            .:....:::|..:.|.|..||| :||..||...:::.....||     |.:.:.|.:.:..|   
Human   132 GESEKQFQEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELCAC-----LDKQRPCQSYNGKQVYK 191

  Fly   186 HGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCLY 225
            ..|:..:.:.|....:|:..:..|:|.|::|.::|:..||
Human   192 ETCISFIKDFLAKNLIIVIGISFGLAVIEILGLVFSMVLY 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 67/229 (29%)
tetraspanin_LEL 131..>167 CDD:351888 11/36 (31%)
TSPAN8NP_004607.1 Tetraspanin 8..232 CDD:459767 67/229 (29%)
hydrophobic region 10..33 9/22 (41%)
hydrophobic region 58..78 11/19 (58%)
hydrophobic region 83..109 8/25 (32%)
TM4SF3_like_LEL 106..206 CDD:239407 22/104 (21%)
hydrophobic region 206..232 8/26 (31%)

Return to query results.
Submit another query.