DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp39D and TSPAN7

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_004606.2 Gene:TSPAN7 / 7102 HGNCID:11854 Length:249 Species:Homo sapiens


Alignment Length:235 Identity:62/235 - (26%)
Similarity:111/235 - (47%) Gaps:21/235 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWTAPIILMIVGAAVAVICFLG 70
            :||:|.|....:.:|.:||:::..||...:|....|.:.::::...||.:|:..|..:.|....|
Human    12 ITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAENSTNAPYVLIGTGTTIVVFGLFG 76

  Fly    71 CCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMES---QFNSTMQHYKERADYR 132
            |....:.|..|:..:|:...::||.|:..|::|:|..   |:|.::   .:...||.|....:..
Human    77 CFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFR---HEIKDTFLRTYTDAMQTYNGNDERS 138

  Fly   133 DAWTLLQTELDCCGINGPNDWET--VYRNSTLPAACC---------SVINLSEAKECTNTHATQH 186
            .|...:|..|.|||:....:|.|  .:....:|.:||         .:.||:.|.    |...|.
Human   139 RAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCCMNETDCNPQDLHNLTVAA----TKVNQK 199

  Fly   187 GCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCLYR 226
            ||...:...:::...|:|.|..|:|..|::.:|.||||.|
Human   200 GCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSR 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 59/230 (26%)
tetraspanin_LEL 131..>167 CDD:351888 9/37 (24%)
TSPAN7NP_004606.2 Tetraspanin 15..239 CDD:459767 59/230 (26%)
TM4SF2_6_like_LEL 110..213 CDD:239414 24/109 (22%)

Return to query results.
Submit another query.