DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and Cd151

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_071968.1 Gene:Cd151 / 64315 RGDID:621290 Length:253 Species:Rattus norvegicus


Alignment Length:245 Identity:72/245 - (29%)
Similarity:114/245 - (46%) Gaps:21/245 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASGGLTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWTA-PIILMIVGAAVAV 65
            |:.|..|:|||.|..|..|.|.||.:..||.......:.|.:.::...:.| ..||::.|..|.|
  Rat     9 ATCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASSTYLATAYILVVAGVVVMV 73

  Fly    66 ICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTM---QHYKE 127
            ...||||...||...::..:.:|.::|||.||..|:..||.:..|:..::.....||   .|...
  Rat    74 TGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYVYYQQLNTELKENLKDTMIKRYHQSG 138

  Fly   128 RADYRDAWTLLQTELDCCGINGPNDWETVYRNS-----------TLPAACCS--VINLSEAKECT 179
            .....:|...||.|..|||.|...||    |:|           .:|.:||.  |....:.:..:
  Rat   139 HEGVTNAVDKLQQEFHCCGSNNSRDW----RDSEWIRSGEADSRVVPDSCCKTVVTGCGKREHAS 199

  Fly   180 NTHATQHGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCLYRSFR 229
            |.:..:.||:.||...:.....::.:|.:|:|.:|:..::|.||||||.:
  Rat   200 NIYKVEGGCITKLESFIQEHLRVIGAVGIGIACVQVFGMIFTCCLYRSLK 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 66/233 (28%)
tetraspanin_LEL 131..>167 CDD:351888 13/46 (28%)
Cd151NP_071968.1 Tetraspanin 16..246 CDD:459767 66/233 (28%)
CD151_like_LEL 112..220 CDD:239408 27/111 (24%)

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