DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and tspan9a

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:XP_073785985.1 Gene:tspan9a / 555341 ZFINID:ZDB-GENE-060503-632 Length:336 Species:Danio rerio


Alignment Length:243 Identity:73/243 - (30%)
Similarity:123/243 - (50%) Gaps:15/243 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASGGLTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNF-VSDHVWTAPIILMIVGAAVA 64
            ||.|.|.|:||:.|..||:|.|.|..:..||..:.::...::.| .|....:|..:::.:||.|.
Zfish    98 MARGCLCCLKYMMFVFNLIFWLCGCGLLGVGIWLSVSQGSFATFSPSFPSLSAANMVIAIGAIVM 162

  Fly    65 VICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYK--E 127
            |..||||.||:||:.|::|||.::.::|.|.|:.|.:..:|....:.:..:......:..|.  .
Zfish   163 VTGFLGCLGAIKENKCLLLSFFIVLLIILLAELILLILFFVYSDKVSENAKQDLKDGLALYNTDN 227

  Fly   128 RADYRDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKEC----TNTHATQHGC 188
            ....|:||.::|.|..|||:.|..||....:...:|..||.    ...:||    ||...|: ||
Zfish   228 NIGLRNAWNIIQAEWKCCGVTGYTDWHDALKEKVVPDRCCQ----EHYQECGRNSTNMFWTR-GC 287

  Fly   189 LQKLLEILDSKTLILASVVLGVAGIQMLTILFACCLYRSFRRS---YD 233
            .:|:.|.|:....:|.::.:.:..:|:|.:.|:..|:....||   ||
Zfish   288 YEKVEEWLEDNKHLLGTIGMCILVVQLLGMAFSMTLFHQIHRSGKKYD 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 64/223 (29%)
tetraspanin_LEL 131..>167 CDD:351888 12/35 (34%)
tspan9aXP_073785985.1 None

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