DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and tspan4l

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001415142.1 Gene:tspan4l / 549038 XenbaseID:XB-GENE-958395 Length:237 Species:Xenopus tropicalis


Alignment Length:236 Identity:63/236 - (26%)
Similarity:114/236 - (48%) Gaps:23/236 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASGGLTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNF-VSDHVWTAPIILMIVGAAVA 64
            |..|.|.|:|...|..||:|.|.|..|..||..:.:....::.. ||....:|..:.|:.|:.:.
 Frog     3 MTRGCLLCIKITMFIFNLIFWLGGCGILGVGVWLAVTQGKFATLSVSFPSLSAASLFMVTGSIIM 67

  Fly    65 VICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHT-GLHQIMESQFNSTMQHYKER 128
            |:.|:||.||:.|..|::|:|.::.::|||.|: :.:|.::.:| ..|...:......:|.|...
 Frog    68 VVGFIGCLGAVTEHRCLLLTFFVILLIIFLLEM-ISMALFLTYTEQFHNYAQEDLKKGLQLYNTT 131

  Fly   129 AD--YRDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECTNTHAT--QHGCL 189
            .:  ..:||.::|||..|||:....||  :....::|..||    :..:..|.:....  :..|.
 Frog   132 GNLGLTNAWDIVQTEFRCCGVKNATDW--LESKGSVPHTCC----VEHSPACKSNPKLWWEEACY 190

  Fly   190 QKLLEILDSKTLILASVVLGVAGI-----QMLTILFACCLY 225
            .|:...::|.   :.||  |:.||     |:..::|:..:|
 Frog   191 NKVRNWVESN---IRSV--GIFGICILVVQVFGLIFSMLMY 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 59/228 (26%)
tetraspanin_LEL 131..>167 CDD:351888 11/35 (31%)
tspan4lNP_001415142.1 None

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