DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and tspan36

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001002748.1 Gene:tspan36 / 437021 ZFINID:ZDB-GENE-040718-248 Length:243 Species:Danio rerio


Alignment Length:235 Identity:64/235 - (27%)
Similarity:105/235 - (44%) Gaps:24/235 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GLTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWTAPIILMIVGAAVA--VIC 67
            |:...|.:....:|:|...|..:..||..|..:|.::.:|:||.....|..: |:|.||.  :|.
Zfish     4 GIITSKTILLLLSLIFWAAGAALAYVGSYVIKSYNNFEDFMSDRHTLIPAAI-IIGVAVVMFIIG 67

  Fly    68 FLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYKERADYR 132
            |:|||..|:||...:..|.::.::||..|:...:.|.:....:...:|...|.....|.......
Zfish    68 FVGCCATLRESKVGLGLFLIIIMLIFAAEVTAFVFGIIYRGRIRGDLEKSMNDVFLKYDGLNSET 132

  Fly   133 DAWTLLQTELDCCGINGPNDWET----VYRNSTLPAACCSVINLSEAKECT---------NTHAT 184
            .|...||::|:|||:....||..    ...|:|:|.:||.. |::   :||         ||   
Zfish   133 HAVDYLQSQLECCGVKNQTDWTLTSWFAQHNNTVPQSCCKA-NMT---QCTGQLSQPDLLNT--- 190

  Fly   185 QHGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCL 224
             .||..||.::|.........|:||.|.|:...:|..|.:
Zfish   191 -QGCEAKLEQVLQDVLSYAMLVILGFAIIKFFGMLSVCVI 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 63/231 (27%)
tetraspanin_LEL 131..>167 CDD:351888 12/39 (31%)
tspan36NP_001002748.1 Tetraspanin 8..231 CDD:459767 63/231 (27%)
TM4SF8_like_LEL 103..206 CDD:239416 28/110 (25%)

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