DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and Tsp86D

DIOPT Version :9

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster


Alignment Length:254 Identity:59/254 - (23%)
Similarity:119/254 - (46%) Gaps:45/254 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TCVKYLTFFCNLLFALTGLLIFLVG------------GMVQLNYAHYSNFVSDHVWTAPIILMIV 59
            :||||:.|..|.||.|.|.|:..:|            |.::|      :.:.|.::...::::|.
  Fly    29 SCVKYMIFLLNFLFWLFGGLLLAIGVYAFMDKLMDGNGWLRL------DTIYDVIFNISLVMIIA 87

  Fly    60 GAAVAVICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQH 124
            |..|..:.|.||.|||:|::.::..:::..::.|:.|:.|.:..:|....::..:|.||...:.|
  Fly    88 GVIVFTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIH 152

  Fly   125 -YKERADYRDAWTLLQTELDCCGIN--GPNDW-ETVYRNST--------LPAACC--------SV 169
             |::.:|.::.....|.|.:|||::  |..|| :..|.|.:        :|.:||        .:
  Fly   153 SYRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPYSCCINATDISSGL 217

  Fly   170 INLS-------EAKECTNTHATQHGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFA 221
            :|:.       .:....:......||::.:...::....::|.|.||:|.:|:..|..|
  Fly   218 VNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGIALLQLFVIYLA 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspannin 8..227 CDD:278750 59/253 (23%)
tetraspanin_LEL 104..200 CDD:239401 23/122 (19%)
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 48/232 (21%)
penumbra_like_LEL 132..255 CDD:239411 23/122 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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