DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp39D and cd151l

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_991213.1 Gene:cd151l / 402948 ZFINID:ZDB-GENE-040426-1868 Length:254 Species:Danio rerio


Alignment Length:243 Identity:74/243 - (30%)
Similarity:121/243 - (49%) Gaps:22/243 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GLTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVW-TAPIILMIVGAAVAVICF 68
            |..|:|||.|..|.||.|.|:.:..||....:..:.|.:.:|..:: .:..||::.|..|.:...
Zfish    12 GTICLKYLLFTFNFLFWLAGVAVMAVGIWTVIEKSDYISLLSSKIYAVSAYILIMAGVIVMITGV 76

  Fly    69 LGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTM-QHY--KERAD 130
            ||||...||...::..:.:|.:.|||.||..|:..|:.:..|:..::.....|| |.|  .|:..
Zfish    77 LGCCATFKEQRRLLRVYFVLLLCIFLLEILAGVLAYIYYQQLNDELKENLRETMVQKYNQSEQEH 141

  Fly   131 YRDAWTLLQTELDCCGINGPNDW-ETVYRNST------LPAACC-SVINLSEAKEC------TNT 181
            ...|...||.|..|||.|..:|| ::.:..|:      :|.:|| |.:.    |.|      :|.
Zfish   142 VTKAVDKLQQEFKCCGSNSSSDWVDSAWIRSSEADGRLVPDSCCKSPVR----KFCGRRDHPSNI 202

  Fly   182 HATQHGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCLYRSFR 229
            :..:.||:.||...:.:...|:.:|.:|||.:|::.:.|.||||||.:
Zfish   203 YKVEGGCITKLENFILNHLQIIGAVGVGVASVQIVGMFFTCCLYRSLK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 69/234 (29%)
tetraspanin_LEL 131..>167 CDD:351888 12/42 (29%)
cd151lNP_991213.1 Tetraspanin 16..247 CDD:459767 69/234 (29%)
CD151_like_LEL 112..221 CDD:239408 29/112 (26%)

Return to query results.
Submit another query.